Leonardo Mariño-Ramírez

Publication Activity (10 Years)

Years Active: 2005-2023
Publications (10 Years): 7

Top Topics

Computational Tools

Gene Regulation

Top Venues

Database J. Biol. Databases Curation

Briefings Bioinform.

Publications

Shashwat Deepali Nagar, I King Jordan, Leonardo Mariño-Ramírez
The landscape of health disparities in the UK Biobank. Database J. Biol. Databases Curation 2023 (2023)
Whitney L. Teagle, Emily T. Norris, Lavanya Rishishwar, Shashwat Deepali Negar, I. King Jordan, Leonardo Mariño-Ramírez
Comorbidities and Ethnic Health Disparities in the UK Biobank. AMIA (2022)
Roberto Vera Alvarez, Lorinc Sándor Pongor, Leonardo Mariño-Ramírez, David Landsman
TPMCalculator: one-step software to quantify mRNA abundance of genomic features. Bioinform. 35 (11) (2019)
Roberto Vera Alvarez, Newton Medeiros Vidal, Gina A. Garzón-Martínez, Luz S. Barrero, David Landsman, Leonardo Mariño-Ramírez
Workflow and web application for annotating NCBI BioProject transcriptome data. Database J. Biol. Databases Curation 2017 (2017)
Lavanya Rishishwar, Leonardo Mariño-Ramírez, I. King Jordan
Benchmarking computational tools for polymorphic transposable element detection. Briefings Bioinform. 18 (6) (2017)
Natalia Acevedo-Luna, Leonardo Mariño-Ramírez, Armand Halbert, Ulla Hansen, David Landsman, John L. Spouge
Most of the tight positional conservation of transcription factor binding sites near the transcription start site reflects their co-localization within regulatory modules. BMC Bioinform. 17 (2016)
Eli J. Draizen, Alexey K. Shaytan, Leonardo Mariño-Ramírez, Paul B. Talbert, David Landsman, Anna R. Panchenko
HistoneDB 2.0: a histone database with variants - an integrated resource to explore histones and their variants. Database J. Biol. Databases Curation 2016 (2016)
John L. Spouge, Leonardo Mariño-Ramírez, Sergey L. Sheetlin
Searching for repeats, as an example of using the generalised Ruzzo-Tompa algorithm to find optimal subsequences with gaps. Int. J. Bioinform. Res. Appl. 10 (4/5) (2014)
John L. Spouge, Leonardo Mariño-Ramírez, Sergey Sheetlin
The ruzzo-tompa algorithm can find the maximal paths in weighted, directed graphs on a one-dimensional lattice. ICCABS (2012)
Leonardo Mariño-Ramírez, Kevin M. Levine, Mario Morales, Suiyuan Zhang, Travis Moreland, Andreas D. Baxevanis, David Landsman
The Histone Database: an integrated resource for histones and histone fold-containing proteins. Database J. Biol. Databases Curation 2011 (2011)
Nak-Kyeong Kim, Kannan Tharakaraman, Leonardo Mariño-Ramírez, John L. Spouge
Finding sequence motifs with Bayesian models incorporating positional information: an application to transcription factor binding sites. BMC Bioinform. 9 (2008)
Kannan Tharakaraman, Leonardo Mariño-Ramírez, Sergey Sheetlin, David Landsman, John L. Spouge
Scanning sequences after Gibbs sampling to find multiple occurrences of functional elements. BMC Bioinform. 7 (2006)
Kannan Tharakaraman, Leonardo Mariño-Ramírez, Sergey Sheetlin, David Landsman, John L. Spouge
Alignments anchored on genomic landmarks can aid in the identification of regulatory elements. ISMB (Supplement of Bioinformatics) (2005)