Lars Ailo Bongo

Publication Activity (10 Years)

Years Active: 2002-2024
Publications (10 Years): 30

Top Topics

Interactive Exploration

Biological Data

Machine Learning

Top Venues

Publications

Nikita Shvetsov, Anders Sildnes, Lill-Tove Rasmussen Busund, Stig Dalen, Kajsa Møllersen, Lars Ailo Bongo, Thomas K. Kilvaer
Fast TILs estimation in lung cancer WSIs based on semi-stochastic patch sampling. CoRR (2024)
Bjørn-Richard Pedersen, Maisha Islam, Doris Tove Kristoffersen, Lars Ailo Bongo, Eilidh Garrett, Alice Reid, Hilde L. Sommerseth
Coding historical causes of death data with Large Language Models. CoRR (2024)
Masoud Tafavvoghi, Lars Ailo Bongo, Nikita Shvetsov, Lill-Tove Rasmussen Busund, Kajsa Møllersen
Publicly available datasets of breast histopathology H&E whole-slide images: A systematic review. CoRR (2023)
Bjørn-Richard Pedersen, Rigmor Katrine Johansen, Einar J. Holsbø, Hilde L. Sommerseth, Lars Ailo Bongo
More efficient manual review of automatically transcribed tabular data. CoRR (2023)
Pavitra Chauhan, Mohsen Gamal Saad Askar, Bjørn Fjukstad, Lars Ailo Bongo, Edvard Pedersen
Interoperable synthetic health data with SyntHIR to enable the development of CDSS tools. CoRR (2023)
Bjørn-Jostein Singstad, Antony M. Gitau, Markus Kreutzer Johnsen, Johan Ravn, Lars Ailo Bongo, Henrik Schirmer
Phonocardiogram Classification Using 1-Dimensional Inception Time Convolutional Neural Networks. CinC (2022)
Dina Benedicte Stensen, Rafael Adolfo Nozal Cañadas, Lars Småbrekke, Karina Standahl Olsen, Christopher Sivert Nielsen, Kristian Svendsen, Anne Merethe Hanssen, Johanna Sollid, Gunnar Skov Simonsen, Lars Ailo Bongo, Anne-Sofie Furberg
Social network analysis of Staphylococcus aureus carriage in a general youth population. CoRR (2022)
Nikita Shvetsov, Morten Grønnesby, Edvard Pedersen, Kajsa Møllersen, Lill-Tove Rasmussen Busund, Ruth Schwienbacher, Lars Ailo Bongo, Thomas K. Kilvaer
A Pragmatic Machine Learning Approach to Quantify Tumor Infiltrating Lymphocytes in Whole Slide Images. CoRR (2022)
Bjørn-Richard Pedersen, Einar J. Holsbø, Trygve Andersen, Nikita Shvetsov, Johan Ravn, Hilde Leikny Sommerseth, Lars Ailo Bongo
Occode: an end-to-end machine learning pipeline for transcription of historical population censuses. CoRR (2021)
Álvaro Martínez Fernández, Lars Ailo Bongo, Edvard Pedersen
GeneNet VR: Interactive visualization of large-scale biological networks using a standalone headset. CoRR (2021)
Tengel Ekrem Skar, Einar J. Holsbø, Kristian Svendsen, Lars Ailo Bongo
Interactive exploration of population scale pharmacoepidemiology datasets. CoRR (2020)
Cristina Jácome, Johan Ravn, Einar J. Holsbø, Juan Carlos Aviles Solis, Hasse Melbye, Lars Ailo Bongo
Convolutional neural network for breathing phase detection in lung sounds. CoRR (2019)
Cristina Jácome, Johan Ravn, Einar J. Holsbø, Juan Carlos Aviles Solis, Hasse Melbye, Lars Ailo Bongo
Convolutional Neural Network for Breathing Phase Detection in Lung Sounds. Sensors 19 (8) (2019)
Bjørn Fjukstad, Nina Angelvik, Morten Grønnesby, Maria Wulff Hauglann, Hedinn Gunhildrud, Fredrik Høisæther Rasch, Julianne Iversen, Margaret Dalseng, Lars Ailo Bongo
Teaching Electronics and Programming in Norwegian Schools Using the air: bit Sensor Kit. ITiCSE (2019)
Bjørn Fjukstad, Nina Angelvik, Morten Grønnesby, Maria Wulff Hauglann, Hedinn Gunhildrud, Fredrik Høisæther Rasch, Julianne Iversen, Margaret Dalseng, Lars Ailo Bongo
Teaching Electronics and Programming in Norwegian Schools Using the air: bit Sensor Kit. CoRR (2019)
Bjørn Fjukstad, Vanessa Dumeaux, Michael Hallett, Lars Ailo Bongo
Reproducible Data Analysis Pipelines for Precision Medicine. PDP (2019)
Inge Alexander Raknes, Lars Ailo Bongo
META-pipe Authorization service. F1000Research 7 (2018)
Bjørn Fjukstad, Nina Angelvik, Maria Wulff Hauglann, Joachim Sveia Knutsen, Morten Grønnesby, Hedinn Gunhildrud, Lars Ailo Bongo
Low-Cost Programmable Air Quality Sensor Kits in Science Education. SIGCSE (2018)
Mike Voets, Kajsa Møllersen, Lars Ailo Bongo
Replication study: Development and validation of deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs. CoRR (2018)
Kidane M. Tekle, Sveinung Gundersen, Kjetil Klepper, Lars Ailo Bongo, Inge Alexander Raknes, Xiaxi Li, Wei Zhang, Christian Andreetta, Teshome Dagne Mulugeta, Matús Kalas, Morten B. Rye, Erik Hjerde, Jeevan Karloss Antony Samy, Ghislain Fornous, Abdulrahman Azab, Dag Inge Våge, Eivind Hovig, Nils Peder Willassen, Finn Drabløs, Ståle Nygård, Kjell Petersen, Inge Jonassen
Norwegian e-Infrastructure for Life Sciences (NeLS). F1000Research 7 (2018)
Vanessa Dumeaux, Bjørn Fjukstad, Hans E. Fjosne, Jan-Ole Frantzen, Marit Muri Holmen, Enno Rodegerdts, Ellen Schlichting, Anne-Lise Børresen-Dale, Lars Ailo Bongo, Eiliv Lund, Michael Hallett
Interactions between the tumor and the blood systemic response of breast cancer patients. PLoS Comput. Biol. 13 (9) (2017)
Morten Grønnesby, Juan Carlos Aviles Solis, Einar J. Holsbø, Hasse Melbye, Lars Ailo Bongo
Machine Learning Based Crackle Detection in Lung Sounds. CoRR (2017)
Edvard Pedersen, Lars Ailo Bongo
Large-scale biological meta-database management. Future Gener. Comput. Syst. 67 (2017)
Aleksandr Agafonov, Kimmo Mattila, Cuong Duong Tuan, Lars Tiede, Inge Alexander Raknes, Lars Ailo Bongo
META-pipe cloud setup and execution. F1000Research 6 (2017)
Espen Mikal Robertsen, Hubert Denise, Alex L. Mitchell, Robert D. Finn, Lars Ailo Bongo, Nils Peder Willassen
ELIXIR pilot action: Marine metagenomics - towards a domain specific set of sustainable services. F1000Research 6 (2017)
Bjørn Fjukstad, Vanessa Dumeaux, Karina Standahl Olsen, Eiliv Lund, Michael Hallett, Lars Ailo Bongo
Building Applications for Interactive Data Exploration in Systems Biology. BCB (2017)
Inge Alexander Raknes, Bjørn Fjukstad, Lars Ailo Bongo
nsroot: Minimalist process isolation tool implemented with Linux namespaces. NIK (2017)
Bjørn Fjukstad, Lars Ailo Bongo
A Review of Scalable Bioinformatics Pipelines. Data Sci. Eng. 2 (3) (2017)
Espen Mikal Robertsen, Tim Kahlke, Inge Alexander Raknes, Edvard Pedersen, Erik Kjærner-Semb, Martin Ernstsen, Lars Ailo Bongo, Nils Peder Willassen
META-pipe - Pipeline Annotation, Analysis and Visualization of Marine Metagenomic Sequence Data. CoRR (2016)
Inge Alexander Raknes, Bjørn Fjukstad, Lars Ailo Bongo
nsroot: Minimalist Process Isolation Tool Implemented With Linux Namespaces. CoRR (2016)
Ove Kåven, Lars Ailo Bongo
MORTAL - Multiparadigm Optimizing Retargetable Transdisciplinary Abstraction Language. NIK (2015)
Edvard Pedersen, Lars Ailo Bongo
Large-scale Biological Meta-Database Management. CoRR (2015)
Edvard Pedersen, Inge Alexander Raknes, Martin Ernstsen, Lars Ailo Bongo
Integrating Data-Intensive Computing Systems with Biological Data Analysis Frameworks. PDP (2015)
Milan Mihajlovic, Lars Ailo Bongo, Raimondas Ciegis, Neki Frasheri, Dragi Kimovski, Peter G. Kropf, Svetozar Margenov, Maya G. Neytcheva, Thomas Rauber, Gudula Rünger, Roman Trobec, Roel Wuyts, Roman Wyrzykowski, Jing Gong
Applications for ultrascale computing. Supercomput. Front. Innov. 2 (1) (2015)
Bjørn Fjukstad, Karina Standahl Olsen, Mie Jareid, Eiliv Lund, Lars Ailo Bongo
Kvik: three-tier data exploration tools for flexible analysis of genomic data in epidemiological studies. F1000Research 4 (2015)
Bjørn Fjukstad, Karina Standahl Olsen, Mie Jareid, Eiliv Lund, Lars Ailo Bongo
Kvik: Interactive exploration of genomic data from the NOWAC postgenome biobank. NIK (2014)
Lars Ailo Bongo, Edvard Pedersen, Martin Ernstsen
Data-Intensive Computing Infrastructure Systems for Unmodified Biological Data Analysis Pipelines. CIBB (2014)
Martin Ernstsen, Erik Kjærner-Semb, Nils Peder Willassen, Lars Ailo Bongo
Mario: Interactive Tuning of Biological Analysis Pipelines Using Iterative Processing. Euro-Par Workshops (1) (2014)
Giacomo Tartari, Lars Tiede, Einar J. Holsbø, Kenneth Knudsen, Inge Alexander Raknes, Bjørn Fjukstad, Nicolle Mode, John Markus Bjørndalen, Eiliv Lund, Lars Ailo Bongo
Mr. Clean: A Tool for Tracking and Comparing the Lineage of Scientific Visualization Code. VISSOFT (2014)
Edvard Pedersen, Nils Peder Willassen, Lars Ailo Bongo
Transparent Incremental Updates for Genomics Data Analysis Pipelines. Euro-Par Workshops (2013)
Lars Ailo Bongo
Bulk synchronous visualization. PMAM (2013)
Christopher Y. Park, Aaron K. Wong, Casey S. Greene, Jessica Rowland, Yuanfang Guan, Lars Ailo Bongo, Rebecca D. Burdine, Olga G. Troyanskaya
Functional Knowledge Transfer for High-accuracy Prediction of Under-studied Biological Processes. PLoS Comput. Biol. 9 (3) (2013)
Aaron K. Wong, Christopher Y. Park, Casey S. Greene, Lars Ailo Bongo, Yuanfang Guan, Olga G. Troyanskaya
IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks. Nucleic Acids Res. 40 (Web-Server-Issue) (2012)
William K. Josephson, Lars Ailo Bongo, David Flynn, Kai Li
DFS: A File System for Virtualized Flash Storage. FAST (2010)
William K. Josephson, Lars Ailo Bongo, Kai Li, David Flynn
DFS: A file system for virtualized flash storage. ACM Trans. Storage 6 (3) (2010)
William K. Josephson, Lars Ailo Bongo, David Flynn, Kai Li
DFS: A File System for Virtualized Flash Storage. login Usenix Mag. 35 (2) (2010)
Lars Ailo Bongo, Brian Vinter, Otto J. Anshus, Tore Larsen, John Markus Bjørndalen
Using Overdecomposition to Overlap Communication Latencies with Computation and Take Advantage of SMT Processors. ICPP Workshops (2006)
Lars Ailo Bongo, Grant Wallace, Tore Larsen, Kai Li, Olga G. Troyanskaya
Systems Support for Remote Visualization of Genomics Applications over Wide Area Networks. GCCB (2006)
Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen
Low Overhead High Performance Runtime Monitoring of Collective Communication. ICPP (2005)
Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen
Collective Communication Performance Analysis Within the Communication System. Euro-Par (2004)
Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen, Tore Larsen
Extending Collective Operations with Application Semantics for Improving Multi-Cluster Performance. ISPDC/HeteroPar (2004)
Otto J. Anshus, John Markus Bjørndalen, Lars Ailo Bongo
Experiences Parallelizing, Configuring, Monitoring and Visualizing Applications for Clusters and Multi-Clusters. PARCO (2003)
Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen
EventSpace - Exposing and Observing Communication Behavior of Parallel Cluster Applications. Euro-Par (2003)
John Markus Bjørndalen, Otto J. Anshus, Tore Larsen, Lars Ailo Bongo, Brian Vinter
Scalable Processing and Communication Performance in a Multi-Media Related Context. EUROMICRO (2002)