Kevin W. Eliceiri

Publication Activity (10 Years)

Years Active: 2009-2024
Publications (10 Years): 26

Top Topics

Multiple Instance

Fluorescence Microscopy

Top Venues

Frontiers Bioinform.

Publications

Gabriel J. Selzer, Curtis T. Rueden, Mark C. Hiner, Edward L. Evans, David Kolb, Marcel Wiedenmann, Christian Birkhold, Tim-Oliver Buchholz, Stefan Helfrich, Brian Northan, Alison E. Walter, Johannes E. Schindelin, Tobias Pietzsch, Stephan Saalfeld, Michael R. Berthold, Kevin W. Eliceiri
SciJava Ops: An Improved Algorithms Framework for Fiji and Beyond. CoRR (2024)
Kevin K. D. Tan, Mark A. Tsuchida, Jenu Varghese Chacko, Niklas A. Gahm, Kevin W. Eliceiri
Real-time open-source FLIM analysis. Frontiers Bioinform. 3 (2023)
Hyojoon Park, Bin Li, Yuming Liu, Michael S. Nelson, Helen M. Wilson, Eftychios Sifakis, Kevin W. Eliceiri
Collagen fiber centerline tracking in fibrotic tissue via deep neural networks with variational autoencoder-based synthetic training data generation. Medical Image Anal. 90 (2023)
Wei Ouyang, Kevin W. Eliceiri, Beth A. Cimini
Moving beyond the desktop: prospects for practical bioimage analysis via the web. Frontiers Bioinform. 3 (2023)
Lopamudra Mukherjee, Abdul Kader Sagar, Jonathan N. Ouellette, Jyoti J. Watters, Kevin W. Eliceiri
A deep learning framework for classifying microglia activation state using morphology and intrinsic fluorescence lifetime data. Frontiers Neuroinformatics 16 (2022)
Anjalie Schlaeppi, Wilson Adams, Robert Haase, Jan Huisken, Ryan B. Macdonald, Kevin W. Eliceiri, Elisabeth Kugler
Meeting in the Middle: Towards Successful Multidisciplinary Bioimage Analysis Collaboration. Frontiers Bioinform. 2 (2022)
Bin Li, Yin Li, Kevin W. Eliceiri
Dual-Stream Multiple Instance Learning Network for Whole Slide Image Classification With Self-Supervised Contrastive Learning. CVPR (2021)
Florian Levet, Anne E. Carpenter, Kevin W. Eliceiri, Anna Kreshuk, Peter Bankhead, Robert Haase
Developing open-source software for bioimage analysis: opportunities and challenges. F1000Research 10 (2021)
Bin Li, Adib Keikhosravi, Agnes G. Loeffler, Kevin W. Eliceiri
Single image super-resolution for whole slide image using convolutional neural networks and self-supervised color normalization. Medical Image Anal. 68 (2021)
Jenu Varghese Chacko, Han Nim Lee, Wenxin Wu, Marisa S. Otegui, Kevin W. Eliceiri
Hyperdimensional Imaging Contrast Using an Optical Fiber. Sensors 21 (4) (2021)
Minxuan Zhou, Yunhui Guo, Weihong Xu, Bin Li, Kevin W. Eliceiri, Tajana Rosing
MAT: Processing In-Memory Acceleration for Long-Sequence Attention. DAC (2021)
Bin Li, Kevin W. Eliceiri
Dual-stream Maximum Self-attention Multi-instance Learning. CoRR (2020)
Christian Dietz, Curtis T. Rueden, Stefan Helfrich, Ellen T. A. Dobson, Martin Horn, Jan Eglinger, Edward L. Evans, Dalton T. McLean, Tatiana Novitskaya, William A. Ricke, Nathan M. Sherer, Andries Zijlstra, Michael R. Berthold, Kevin W. Eliceiri
Integration of the ImageJ Ecosystem in KNIME Analytics Platform. Frontiers Comput. Sci. 2 (2020)
Bin Li, Yin Li, Kevin W. Eliceiri
Dual-stream Multiple Instance Learning Network for Whole Slide Image Classification with Self-supervised Contrastive Learning. CoRR (2020)
Shulei Wang, Ellen T. Arena, Jordan T. Becker, William M. Bement, Nathan M. Sherer, Kevin W. Eliceiri, Ming Yuan
Spatially Adaptive Colocalization Analysis in Dual-Color Fluorescence Microscopy. IEEE Trans. Image Process. 28 (9) (2019)
Jongho Lee, Jenu Varghese Chacko, Bing Dai, Syed Azer Reza, Abdul Kader Sagar, Kevin W. Eliceiri, Andreas Velten, Mohit Gupta
Coding Scheme Optimization for Fast Fluorescence Lifetime Imaging. ACM Trans. Graph. 38 (3) (2019)
Joyce Ma, Eyal Shahar, Kevin W. Eliceiri, Guneet Mehta, Kristina Yu
Shedding Light: Integrating Bioimaging Technologies into the Design of an Interactive Museum Exhibit. Conference on Designing Interactive Systems (2019)
Lopamudra Mukherjee, Adib Keikhosravi, Kevin W. Eliceiri
Neighborhood regularized image superresolution for applications to microscopic imaging. ISBI (2018)
Shulei Wang, Ellen T. Arena, Kevin W. Eliceiri, Ming Yuan
Automated and Robust Quantification of Colocalization in Dual-Color Fluorescence Microscopy: A Nonparametric Statistical Approach. IEEE Trans. Image Process. 27 (2) (2018)
Kyle I. S. Harrington, Curtis T. Rueden, Kevin W. Eliceiri
FunImageJ: a Lisp framework for scientific image processing. Bioinform. 34 (5) (2018)
Curtis T. Rueden, Johannes E. Schindelin, Mark C. Hiner, Barry E. DeZonia, Alison E. Walter, Ellen T. Arena, Kevin W. Eliceiri
ImageJ2: ImageJ for the next generation of scientific image data. BMC Bioinform. 18 (1) (2017)
Ignacio Arganda-Carreras, Verena Kaynig, Curtis Rueden, Kevin W. Eliceiri, Johannes E. Schindelin, Albert Cardona, H. Sebastian Seung
Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification. Bioinform. 33 (15) (2017)
Curtis T. Rueden, Johannes E. Schindelin, Mark C. Hiner, Barry E. DeZonia, Alison E. Walter, Kevin W. Eliceiri
ImageJ2: ImageJ for the next generation of scientific image data. CoRR (2017)
Mark C. Hiner, Curtis T. Rueden, Kevin W. Eliceiri
ImageJ-MATLAB: a bidirectional framework for scientific image analysis interoperability. Bioinform. 33 (4) (2017)
Mark C. Hiner, Curtis Rueden, Kevin W. Eliceiri
SCIFIO: an extensible framework to support scientific image formats. BMC Bioinform. 17 (2016)
Aprameya Mysore, Andreas Velten, Kevin W. Eliceiri
Sonification of hyperspectral fluorescence microscopy datasets. F1000Research 5 (2016)
Ramin Pashaie, Ryan Baumgartner, Thomas J. Richner, Sarah K. Brodnick, Mehdi Azimipour, Kevin W. Eliceiri, Justin C. Williams
Closed-Loop Optogenetic Brain Interface. IEEE Trans. Biomed. Eng. 62 (10) (2015)
Sarah K. Brodnick, Mohammed R. Hayat, Sahil Kapur, Thomas J. Richner, Michael W. Nonte, Kevin W. Eliceiri, Lisa Krugner-Higby, Justin C. Williams, Samuel O. Poore
A chronic window imaging device for the investigation of in vivo peripheral nerves. EMBC (2014)
Lee Kamentsky, Thouis R. Jones, Adam Fraser, Mark-Anthony Bray, David J. Logan, Katherine L. Madden, Vebjorn Ljosa, Curtis Rueden, Kevin W. Eliceiri, Anne E. Carpenter
Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software. Bioinform. 27 (8) (2011)
Matthew T. Dougherty, Michael J. Folk, Erez Zadok, Herbert J. Bernstein, Frances C. Bernstein, Kevin W. Eliceiri, Werner Benger, Christoph Best
Unifying biological image formats with HDF5. Commun. ACM 52 (10) (2009)
Jared Doot, Kevin W. Eliceiri, Robert D. Nowak, Rebecca Willett
Image Reconstruction of Multiphoton Microscopy Data. ISBI (2009)
Matthew T. Dougherty, Michael J. Folk, Erez Zadok, Herbert J. Bernstein, Frances C. Bernstein, Kevin W. Eliceiri, Werner Benger, Christoph Best
Unifying Biological Image Formats with HDF5. ACM Queue 7 (9) (2009)