Julie Cowart

Publication Activity (10 Years)

Years Active: 2014-2022
Publications (10 Years): 7

Top Topics

Knowledge Extraction

Machine Learning

Subcellular Localization

Protein Structure

Top Venues

Nucleic Acids Res.

Database J. Biol. Databases Curation

Publications

Sachin Gavali, Karen Ross, Chuming Chen, Julie Cowart, Cathy H. Wu
A knowledge graph representation learning approach to predict novel kinase-substrate interactions. CoRR (2022)
Sachin Gavali, Chuming Chen, Julie Cowart, Xi Peng, Shanshan Ding, Cathy H. Wu, Tammy Anderson
Understanding the factors related to the opioid epidemic using machine learning. BIBM (2021)
Sachin Gavali, Chuming Chen, Julie Cowart, Xi Peng, Shanshan Ding, Cathy Wu, Tammy Anderson
Understanding the factors driving the opioid epidemic using machine learning. CoRR (2021)
Hongzhan Huang, Cecilia N. Arighi, Karen E. Ross, Jia Ren, Gang Li, Sheng-Chih Chen, Qinghua Wang, Julie Cowart, K. Vijay-Shanker, Cathy H. Wu
iPTMnet: an integrated resource for protein post-translational modification network discovery. Nucleic Acids Res. 46 (Database-Issue) (2018)
Sachin Gavali, Julie Cowart, Chuming Chen, Karen Ross, Cathy H. Wu
RESTful API for iPTMnet: An Integrated Resource for Protein Post-translational Modification Network Discovery. BCB (2018)
Jia Ren, Gang Li, Karen Ross, Cecilia N. Arighi, Peter B. McGarvey, Shruti Rao, Julie Cowart, Subha Madhavan, K. Vijay-Shanker, Cathy H. Wu
iTextMine: integrated text-mining system for large-scale knowledge extraction from the literature. Database J. Biol. Databases Curation 2018 (2018)
Darren A. Natale, Cecilia N. Arighi, Judith A. Blake, Jonathan P. Bona, Chuming Chen, Sheng-Chih Chen, Karen R. Christie, Julie Cowart, Peter D'Eustachio, Alexander D. Diehl, Harold J. Drabkin, William D. Duncan, Hongzhan Huang, Jia Ren, Karen Ross, Alan Ruttenberg, Veronica Shamovsky, Barry Smith, Qinghua Wang, Jian Zhang, Abdelrahman Elsayed, Cathy H. Wu
Protein Ontology (PRO): enhancing and scaling up the representation of protein entities. Nucleic Acids Res. 45 (Database-Issue) (2017)
Karen Ross, Catalina O. Tudor, Gang Li, Ruoyao Ding, Irem Çelen, Julie Cowart, Cecilia N. Arighi, Darren A. Natale, Cathy H. Wu
Knowledge Representation of Protein PTMs and Complexes in the Protein Ontology: Application to Multi-Faceted Disease Analysis. ICBO (2014)
Darren A. Natale, Cecilia N. Arighi, Judith A. Blake, Carol J. Bult, Karen R. Christie, Julie Cowart, Peter D'Eustachio, Alexander D. Diehl, Harold J. Drabkin, Olivia Helfer, Hongzhan Huang, Anna Maria Masci, Jia Ren, Natalia V. Roberts, Karen Ross, Alan Ruttenberg, Veronica Shamovsky, Barry Smith, Meher Shruti Yerramalla, Jian Zhang, Aisha AlJanahi, Irem Çelen, Cynthia Gan, Mengxi Lv, Emily Schuster-Lezell, Cathy H. Wu
Protein Ontology: a controlled structured network of protein entities. Nucleic Acids Res. 42 (Database-Issue) (2014)