Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.
Darren A. NataleCecilia N. ArighiJudith A. BlakeJonathan P. BonaChuming ChenSheng-Chih ChenKaren R. ChristieJulie CowartPeter D'EustachioAlexander D. DiehlHarold J. DrabkinWilliam D. DuncanHongzhan HuangJia RenKaren RossAlan RuttenbergVeronica ShamovskyBarry SmithQinghua WangJian ZhangAbdelrahman ElsayedCathy H. WuPublished in: Nucleic Acids Res. (2017)
Keyphrases
- protein structure
- protein sequences
- amino acids
- protein structure prediction
- protein interaction data
- domain specific
- protein folding
- molecular dynamics
- contact map
- semantic representation
- molecular structures
- amino acid sequences
- semantic relationships
- tandem mass spectra
- virtual screening
- protein function
- domain knowledge
- protein protein interactions
- knowledge representation
- natural language processing
- feature selection
- subcellular localization
- dead end
- knowledge base
- mass spectrometry data
- keywords
- drug design
- chemical compounds
- image representation
- semantic information
- multiple sequence alignment
- domain ontology
- semantic annotation