Jose Lugo-Martinez

Publication Activity (10 Years)

Years Active: 2010-2023
Publications (10 Years): 8

Top Topics

Probabilistic Inference

Feature Selection

Biological Networks

Protein Complexes

Top Venues

PLoS Comput. Biol.

J. Comput. Biol.

Publications

Peiran Jiang, Ruoxi Cai, Jose Lugo-Martinez, Yaping Guo
A hybrid positive unlabeled learning framework for uncovering scaffolds across human proteome by measuring the propensity to drive phase separation. Briefings Bioinform. 24 (2) (2023)
Hyundoo Jeong, Jose Lugo-Martinez, Anna Ritz, Yijie Wang, Chi Zhang
Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC) Workshop (2022). J. Comput. Biol. 30 (7) (2023)
Jose Lugo-Martinez, Siwei Xu, Justine Levesque, Daniel Gallagher, Leslie A. Parker, Josef Neu, Christopher J. Stewart, Janet E. Berrington, Nicholas D. Embleton, Gregory Young, Katherine E. Gregory, Misty Good, Arti Tandon, David Genetti, Tracy Warren, Ziv Bar-Joseph
Integrating longitudinal clinical and microbiome data to predict growth faltering in preterm infants. J. Biomed. Informatics 128 (2022)
Jose Lugo-Martinez, Daniel Zeiberg, Thomas Gaudelet, Noël Malod-Dognin, Natasa Przulj, Predrag Radivojac
Classification in biological networks with hypergraphlet kernels. Bioinform. 37 (7) (2021)
Jose Lugo-Martinez, Jörn Dengjel, Ziv Bar-Joseph, Robert F. Murphy
Integration of Heterogeneous Experimental Data Improves Global Map of Human Protein Complexes. BCB (2019)
Makoto Yamada, Jiliang Tang, Jose Lugo-Martinez, Ermin Hodzic, Raunak Shrestha, Avishek Saha, Hua Ouyang, Dawei Yin, Hiroshi Mamitsuka, Süleyman Cenk Sahinalp, Predrag Radivojac, Filippo Menczer, Yi Chang
Ultra High-Dimensional Nonlinear Feature Selection for Big Biological Data. IEEE Trans. Knowl. Data Eng. 30 (7) (2018)
Jose Lugo-Martinez, Predrag Radivojac
Classification in biological networks with hypergraphlet kernels. CoRR (2017)
Jose Lugo-Martinez, Vikas Pejaver, Kymberleigh A. Pagel, Shantanu Jain, Matthew E. Mort, David N. Cooper, Sean D. Mooney, Predrag Radivojac
The Loss and Gain of Functional Amino Acid Residues Is a Common Mechanism Causing Human Inherited Disease. PLoS Comput. Biol. 12 (8) (2016)
Jose Lugo-Martinez, Predrag Radivojac
Generalized graphlet kernels for probabilistic inference in sparse graphs. Netw. Sci. 2 (2) (2014)
James F. Denton, Jose Lugo-Martinez, Abraham E. Tucker, Daniel R. Schrider, Wesley C. Warren, Matthew W. Hahn
Extensive Error in the Number of Genes Inferred from Draft Genome Assemblies. PLoS Comput. Biol. 10 (12) (2014)
Ganesh Venkatesh, Jack Sampson, Nathan Goulding, Saturnino Garcia, Vladyslav Bryksin, Jose Lugo-Martinez, Steven Swanson, Michael Bedford Taylor
Conservation cores: reducing the energy of mature computations. ASPLOS (2010)