John T. Halloran

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 10

Top Topics

Graphical Models

Tandem Mass Spectra

Top Venues

Publications

John T. Halloran, Manbir Gulati, Paul F. Roysdon
Mamba State-Space Models Can Be Strong Downstream Learners. CoRR (2024)
John T. Halloran, David M. Rocke
GPU-Accelerated Primal Learning for Extremely Fast Large-Scale Classification. CoRR (2020)
John T. Halloran, David M. Rocke
GPU-Accelerated Primal Learning for Extremely Fast Large-Scale Classification. NeurIPS (2020)
John T. Halloran, David M. Rocke
Learning Concave Conditional Likelihood Models for Improved Analysis of Tandem Mass Spectra. CoRR (2019)
John T. Halloran, David M. Rocke
Gradients of Generative Models for Improved Discriminative Analysis of Tandem Mass Spectra. CoRR (2019)
John T. Halloran, David M. Rocke
Learning Concave Conditional Likelihood Models for Improved Analysis of Tandem Mass Spectra. NeurIPS (2018)
Rishabh K. Iyer, John T. Halloran, Kai Wei
Jensen: An Easily-Extensible C++ Toolkit for Production-Level Machine Learning and Convex Optimization. CoRR (2018)
John T. Halloran
Analyzing Tandem Mass Spectra: A Graphical Models Perspective. AMBN (2017)
John T. Halloran, David M. Rocke
Gradients of Generative Models for Improved Discriminative Analysis of Tandem Mass Spectra. NIPS (2017)
Shengjie Wang, John T. Halloran, Jeff A. Bilmes, William S. Noble
Faster and more accurate graphical model identification of tandem mass spectra using trellises. Bioinform. 32 (12) (2016)
John T. Halloran, Jeff A. Bilmes, William Stafford Noble
Learning Peptide-Spectrum Alignment Models for Tandem Mass Spectrometry. UAI (2014)
Ajit P. Singh, John T. Halloran, Jeff A. Bilmes, Katrin Kirchhoff, William Stafford Noble
Spectrum Identification using a Dynamic Bayesian Network Model of Tandem Mass Spectra. UAI (2012)
Ajit P. Singh, John T. Halloran, Jeff A. Bilmes, Katrin Kirchhoff, William Stafford Noble
Spectrum Identification using a Dynamic Bayesian Network Model of Tandem Mass Spectra CoRR (2012)