John Huddleston

Publication Activity (10 Years)

Years Active: 2007-2023
Publications (10 Years): 5

Top Topics

Data Visualization

Evolutionary History

Phylogenetic Trees

Multidimensional Scaling

Top Venues

J. Open Source Softw.

Nucleic Acids Res.

Frontiers Bioinform.

Publications

Jover Lee, James Hadfield, Allison Black, Thomas R. Sibley, Richard A. Neher, Trevor Bedford, John Huddleston
Joint visualization of seasonal influenza serology and phylogeny to inform vaccine composition. Frontiers Bioinform. 3 (2023)
John Huddleston, James Hadfield, Thomas R. Sibley, Jover Lee, Kairsten Fay, Misja Ilcisin, Elias Harkins, Trevor Bedford, Richard A. Neher, Emma B. Hodcroft
Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens. J. Open Source Softw. 6 (57) (2021)
Sarah Hilton, John Huddleston, Allison Black, Khrystyna North, Adam S. Dingens, Trevor Bedford, Jesse D. Bloom
dms-view: Interactive visualization tool for deep mutational scanning data. J. Open Source Softw. 5 (52) (2020)
James Hadfield, Colin Megill, Sidney M. Bell, John Huddleston, Barney Potter, Charlton Callender, Pavel Sagulenko, Trevor Bedford, Richard A. Neher
Nextstrain: real-time tracking of pathogen evolution. Bioinform. 34 (23) (2018)
Tychele Turner, Qian Yi, Niklas Krumm, John Huddleston, Kendra Hoekzema, Holly A. Stessman, Anna-Lisa Doebley, Raphael A. Bernier, Deborah A. Nickerson, Evan E. Eichler
denovo-db: a compendium of human de novo variants. Nucleic Acids Res. 45 (Database-Issue) (2017)
John Huddleston, Jianna Zhang
Effects of Musically Meaningful operators in Evolutionary Composition. ICMC (2007)
John Huddleston, Jianna Zhang
Evolutionary Rhythm Composition with Trajectory-based Fitness Evaluation. AAAI (2007)