John B. Hogenesch

Publication Activity (10 Years)

Years Active: 2008-2022
Publications (10 Years): 3

Top Topics

High Throughput Technologies

Gene Expression Profiles

Top Venues

Nucleic Acids Res.

Publications

Gang Wu, Marc D. Ruben, Lauren J. Francey, Yin Yeng Lee, Ron C. Anafi, John B. Hogenesch
genome-wide screen for circadian clock strength in human samples. Bioinform. 38 (24) (2022)
Gang Wu, Lauren J. Francey, Marc D. Ruben, John B. Hogenesch
Normalized coefficient of variation (nCV): a method to evaluate circadian clock robustness in population scale data. Bioinform. 37 (23) (2021)
Gang Wu, Ron C. Anafi, Michael Hughes, Karl Kornacker, John B. Hogenesch
MetaCycle: an integrated R package to evaluate periodicity in large scale data. Bioinform. 32 (21) (2016)
Katharina E. Hayer, Angel D. Pizarro, Nicholas F. Lahens, John B. Hogenesch, Gregory R. Grant
Benchmark analysis of algorithms for determining and quantifying full-length mRNA splice forms from RNA-seq data. Bioinform. 31 (24) (2015)
Anastasia Deckard, Ron C. Anafi, John B. Hogenesch, Steven B. Haase, John Harer
Design and analysis of large-scale biological rhythm studies: a comparison of algorithms for detecting periodic signals in biological data. Bioinform. 29 (24) (2013)
Angel D. Pizarro, Katharina Hayer, Nicholas F. Lahens, John B. Hogenesch
CircaDB: a database of mammalian circadian gene expression profiles. Nucleic Acids Res. 41 (Database-Issue) (2013)
Gregory R. Grant, Michael H. Farkas, Angel D. Pizarro, Nicholas F. Lahens, Jonathan Schug, Brian P. Brunk, Christian J. Stoeckert Jr., John B. Hogenesch, Eric A. Pierce
Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM). Bioinform. 27 (18) (2011)
Jon W. Huss III, Pierre Lindenbaum, Michael Martone, Donabel Roberts, Angel D. Pizarro, Faramarz Valafar, John B. Hogenesch, Andrew I. Su
The Gene Wiki: community intelligence applied to human gene annotation. Nucleic Acids Res. 38 (Database-Issue) (2010)
Longlong Yang, John R. Walker, John B. Hogenesch, Russell S. Thomas
NetAtlas: A Cytoscape Plugin to Examine Signaling Networks Based on Tissue Gene Expression. Silico Biol. 8 (1) (2008)
Tom S. Price, Julie E. Baggs, Anne M. Curtis, Garret A. FitzGerald, John B. Hogenesch
WAVECLOCK: wavelet analysis of circadian oscillation. Bioinform. 24 (23) (2008)