John A. P. Sekar

Publication Activity (10 Years)

Years Active: 2016-2020
Publications (10 Years): 5

Top Topics

Image Denoising

Parametric Models

Stochastic Simulation

Simple Examples

Top Venues

PLoS Comput. Biol.

Publications

Arthur P. Goldberg, John A. P. Sekar, Jonathan R. Karr
Exact Parallelization of the Stochastic Simulation Algorithm for Scalable Simulation of Large Biochemical Networks. CoRR (2020)
Jonathan R. Karr, Wolfram Liebermeister, Arthur P. Goldberg, John A. P. Sekar, Bilal Shaikh
Structured spreadsheets with ObjTables enable data reuse and integration. CoRR (2020)
John A. P. Sekar, José Juan Tapia, James R. Faeder
Automated visualization of rule-based models. PLoS Comput. Biol. 13 (11) (2017)
John A. P. Sekar, Justin S. Hogg, James R. Faeder
Energy-based modeling in BioNetGen. BIBM (2016)
Leonard A. Harris, Justin S. Hogg, José Juan Tapia, John A. P. Sekar, Sanjana Gupta, Ilya Korsunsky, Arshi Arora, Dipak Barua, Robert P. Sheehan, James R. Faeder
BioNetGen 2.2: advances in rule-based modeling. Bioinform. 32 (21) (2016)