John A. Bogovic

Publication Activity (10 Years)

Years Active: 2008-2024
Publications (10 Years): 6

Top Topics

Acquisition Process

Feature Representations

Electron Microscopy

Structural Analysis

Top Venues

Publications

Cédric Allier, Magdalena C. Schneider, Michael Innerberger, Larissa Heinrich, John A. Bogovic, Stephan Saalfeld
Decomposing heterogeneous dynamical systems with graph neural networks. CoRR (2024)
Philipp Hanslovsky, John A. Bogovic, Stephan Saalfeld
Image-based correction of continuous and discontinuous non-planar axial distortion in serial section microscopy. Bioinform. 33 (9) (2017)
Larissa Heinrich, John A. Bogovic, Stephan Saalfeld
Deep Learning for Isotropic Super-Resolution from Non-isotropic 3D Electron Microscopy. MICCAI (2) (2017)
Larissa Heinrich, John A. Bogovic, Stephan Saalfeld
Deep Learning for Isotropic Super-Resolution from Non-Isotropic 3D Electron Microscopy. CoRR (2017)
John A. Bogovic, Philipp Hanslovsky, Allan Wong, Stephan Saalfeld
Robust registration of calcium images by learned contrast synthesis. ISBI (2016)
Zhen Yang, Chuyang Ye, John A. Bogovic, Aaron Carass, Bruno M. Jedynak, Sarah H. Ying, Jerry L. Prince
Automated cerebellar lobule segmentation with application to cerebellar structural analysis in cerebellar disease. NeuroImage 127 (2016)
Philipp Hanslovsky, John A. Bogovic, C. Shan Xu, Kenneth J. Hayworth, Zhiyuan Lu, Harald F. Hess, Stephan Saalfeld
Image based compensation for thickness variation in microscopy section series. CoRR (2015)
Philipp Hanslovsky, John A. Bogovic, Stephan Saalfeld
Post-acquisition image based compensation for thickness variation in microscopy section series. ISBI (2015)
John A. Bogovic, Philipp Hanslovsky, Allan Wong, Stephan Saalfeld
Robust Registration of Calcium Images by Learned Contrast Synthesis. CoRR (2015)
John A. Bogovic, Gary B. Huang, Viren Jain
Learned versus Hand-Designed Feature Representations for 3d Agglomeration. ICLR (2014)
Philipp Hanslovsky, John A. Bogovic, Stephan Saalfeld
Post-acquisition image based compensation for thickness variation in microscopy section series. CoRR (2014)
Zhen Yang, John A. Bogovic, Aaron Carass, Mao Ye, Peter C. Searson, Jerry L. Prince
Automatic cell segmentation in fluorescence images of confluent cell monolayers using multi-object geometric deformable model. Medical Imaging: Image Processing (2013)
Bennett A. Landman, John A. Bogovic, Aaron Carass, Min Chen, Snehashis Roy, Navid Shiee, Zhen Yang, Bhaskar Kishore, Dzung L. Pham, Pierre-Louis Bazin, Susan M. Resnick, Jerry L. Prince
System for Integrated Neuroimaging Analysis and Processing of Structure. Neuroinformatics 11 (1) (2013)
John A. Bogovic, Bruno M. Jedynak, Rachel Rigg, Annie Du, Bennett A. Landman, Jerry L. Prince, Sarah H. Ying
Approaching expert results using a hierarchical cerebellum parcellation protocol for multiple inexpert human raters. NeuroImage 64 (2013)
Chuyang Ye, John A. Bogovic, Sarah H. Ying, Jerry L. Prince
Segmentation of the complete superior cerebellar peduncles using a multi-object geometric deformable model. ISBI (2013)
Chuyang Ye, John A. Bogovic, Sarah H. Ying, Jerry L. Prince
Parcellation of the thalamus using diffusion tensor images and a multi-object geometric deformable model. Medical Imaging: Image Processing (2013)
John A. Bogovic, Jerry L. Prince, Pierre-Louis Bazin
A multiple object geometric deformable model for image segmentation. Comput. Vis. Image Underst. 117 (2) (2013)
John A. Bogovic, Pierre-Louis Bazin, Sarah H. Ying, Jerry L. Prince
Automated Segmentation of the Cerebellar Lobules Using Boundary Specific Classification and Evolution. IPMI (2013)
Chuyang Ye, Pierre-Louis Bazin, John A. Bogovic, Sarah H. Ying, Jerry L. Prince
Labeling of the cerebellar peduncles using a supervised Gaussian classifier with volumetric tract segmentation. Medical Imaging: Image Processing (2012)
Bennett A. Landman, Andrew J. Asman, Andrew G. Scoggins, John A. Bogovic, Joshua A. Stein, Jerry L. Prince
Foibles, follies, and fusion: Web-based collaboration for medical image labeling. NeuroImage 59 (1) (2012)
Bennett A. Landman, Andrew J. Asman, Andrew G. Scoggins, John A. Bogovic, Fangxu Xing, Jerry L. Prince
Robust Statistical Fusion of Image Labels. IEEE Trans. Medical Imaging 31 (2) (2012)
Bennett A. Landman, John A. Bogovic, Hanlin Wan, Fatma El Zahraa ElShahaby, Pierre-Louis Bazin, Jerry L. Prince
Resolution of crossing fibers with constrained compressed sensing using diffusion tensor MRI. NeuroImage 59 (3) (2012)
Chuyang Ye, John A. Bogovic, Pierre-Louis Bazin, Jerry L. Prince, Sarah H. Ying
Fully automatic segmentation of the dentate nucleus using diffusion weighted images. ISBI (2012)
Bennett A. Landman, Alan J. Huang, Aliya Gifford, Deepti S. Vikram, Issel Anne L. Lim, Jonathan A. D. Farrell, John A. Bogovic, Jun Hua, Min Chen, Samson Jarso, Seth A. Smith, Suresh Joel, Susumu Mori, James J. Pekar, Peter B. Barker, Jerry L. Prince, Peter C. M. van Zijl
Multi-parametric neuroimaging reproducibility: A 3-T resource study. NeuroImage 54 (4) (2011)
Min Chen, Aaron Carass, John A. Bogovic, Pierre-Louis Bazin, Jerry L. Prince
Distance transforms in multi channel MR image registration. Medical Imaging: Image Processing (2011)
Pierre-Louis Bazin, Chuyang Ye, John A. Bogovic, Navid Shiee, Daniel S. Reich, Jerry L. Prince, Dzung L. Pham
Direct segmentation of the major white matter tracts in diffusion tensor images. NeuroImage 58 (2) (2011)
Blake C. Lucas, John A. Bogovic, Aaron Carass, Pierre-Louis Bazin, Jerry L. Prince, Dzung L. Pham, Bennett A. Landman
The Java Image Science Toolkit (JIST) for Rapid Prototyping and Publishing of Neuroimaging Software. Neuroinformatics 8 (1) (2010)
Bennett A. Landman, Hanlin Wan, John A. Bogovic, Pierre-Louis Bazin, Jerry L. Prince
Resolution of crossing fibers with constrained compressed sensing using traditional diffusion tensor MRI. Medical Imaging: Image Processing (2010)
Xian Fan, Meredith Thompson, John A. Bogovic, Pierre-Louis Bazin, Jerry L. Prince
A novel contrast for DTI visualization for thalamus delineation. Medical Imaging: Image-Guided Procedures (2010)
John A. Bogovic, Bennett A. Landman, Pierre-Louis Bazin, Jerry L. Prince
Statistical fusion of surface labels provided by multiple raters. Medical Imaging: Image Processing (2010)
John A. Bogovic, Pierre-Louis Bazin, Jerry L. Prince
Topology-preserving STAPLE. CVPR Workshops (2010)
Bennett A. Landman, John A. Bogovic, Jerry L. Prince
Simultaneous truth and performance level estimation with incomplete, over-complete, and ancillary data. Medical Imaging: Image Processing (2010)
Blake C. Lucas, John A. Bogovic, Aaron Carass, Pierre-Louis Bazin, Jerry L. Prince, Dzung L. Pham, Bennett A. Landman
Erratum to: The Java Image Science Toolkit (JIST) for Rapid Prototyping and Publishing of Neuroimaging Software. Neuroinformatics 8 (1) (2010)
Pierre-Louis Bazin, John A. Bogovic, Daniel S. Reich, Jerry L. Prince, Dzung L. Pham
Belief Propagation Based Segmentation of White Matter Tracts in DTI. MICCAI (1) (2009)
John A. Bogovic, Aaron Carass, Jing Wan, Bennett A. Landman, Jerry L. Prince
Automatically identifying white matter tracts using cortical labels. ISBI (2008)
Xian Fan, Pierre-Louis Bazin, John A. Bogovic, Ying Bai, Jerry L. Prince
A multiple geometric deformable model framework for homeomorphic 3D medical image segmentation. CVPR Workshops (2008)