Jens Reeder

Publication Activity (10 Years)

Years Active: 2004-2017
Publications (10 Years): 1

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Publications

Jennifer A. Tom, Jens Reeder, William F. Forrest, Robert R. Graham, Julie Hunkapiller, Timothy W. Behrens, Tushar R. Bhangale
Identifying and mitigating batch effects in whole genome sequencing data. BMC Bioinform. 18 (1) (2017)
Stefan Janssen, Jens Reeder, Robert Giegerich
Shape based indexing for faster search of RNA family databases. BMC Bioinform. 9 (2008)
Janina Reeder, Jens Reeder, Robert Giegerich
Locomotif: from graphical motif description to RNA motif search. ISMB/ECCB (Supplement of Bioinformatics) (2007)
Jens Reeder, Peter Steffen, Robert Giegerich
pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Peter Steffen, Björn Voß, Marc Rehmsmeier, Jens Reeder, Robert Giegerich
RNAshapes: an integrated RNA analysis package based on abstract shapes. Bioinform. 22 (4) (2006)
Jens Reeder, Robert Giegerich
Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction. Bioinform. 21 (17) (2005)
Jens Reeder, Robert Giegerich
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics. BMC Bioinform. 5 (2004)