Jarrid Rector-Brooks

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 21

Top Topics

Active Learning

Multiagent Evolutionary Algorithm

Diffusion Models

Conflicting Objectives

Top Venues

Trans. Mach. Learn. Res.

Publications

Marcin Sendera, Minsu Kim, Sarthak Mittal, Pablo Lemos, Luca Scimeca, Jarrid Rector-Brooks, Alexandre Adam, Yoshua Bengio, Nikolay Malkin
On diffusion models for amortized inference: Benchmarking and improving stochastic control and sampling. CoRR (2024)
Tara Akhound-Sadegh, Jarrid Rector-Brooks, Avishek Joey Bose, Sarthak Mittal, Pablo Lemos, Cheng-Hao Liu, Marcin Sendera, Siamak Ravanbakhsh, Gauthier Gidel, Yoshua Bengio, Nikolay Malkin, Alexander Tong
Iterated Denoising Energy Matching for Sampling from Boltzmann Densities. CoRR (2024)
Maksym Korablyov, Cheng-Hao Liu, Moksh Jain, Almer M. van der Sloot, Eric Jolicoeur, Edward Ruediger, Andrei Cristian Nica, Emmanuel Bengio, Kostiantyn Lapchevskyi, Daniel St-Cyr, Doris Alexandra Schuetz, Victor Ion Butoi, Jarrid Rector-Brooks, Simon Blackburn, Leo Feng, Hadi Nekoei, Sai Krishna Gottipati, Priyesh Vijayan, Prateek Gupta, Ladislav Rampásek, Sasikanth Avancha, Pierre-Luc Bacon, William L. Hamilton, Brooks Paige, Sanchit Misra, Stanislaw Kamil Jastrzebski, Bharat Kaul, Doina Precup, José Miguel Hernández-Lobato, Marwin H. S. Segler, Michael M. Bronstein, Anne Marinier, Mike Tyers, Yoshua Bengio
Generative Active Learning for the Search of Small-molecule Protein Binders. CoRR (2024)
Siddarth Venkatraman, Moksh Jain, Luca Scimeca, Minsu Kim, Marcin Sendera, Mohsin Hasan, Luke Rowe, Sarthak Mittal, Pablo Lemos, Emmanuel Bengio, Alexandre Adam, Jarrid Rector-Brooks, Yoshua Bengio, Glen Berseth, Nikolay Malkin
Amortizing intractable inference in diffusion models for vision, language, and control. CoRR (2024)
Avishek Joey Bose, Tara Akhound-Sadegh, Guillaume Huguet, Kilian Fatras, Jarrid Rector-Brooks, Cheng-Hao Liu, Andrei Cristian Nica, Maksym Korablyov, Michael M. Bronstein, Alexander Tong
SE(3)-Stochastic Flow Matching for Protein Backbone Generation. ICLR (2024)
Guillaume Huguet, James Vuckovic, Kilian Fatras, Eric Thibodeau-Laufer, Pablo Lemos, Riashat Islam, Cheng-Hao Liu, Jarrid Rector-Brooks, Tara Akhound-Sadegh, Michael M. Bronstein, Alexander Tong, Avishek Joey Bose
Sequence-Augmented SE(3)-Flow Matching For Conditional Protein Backbone Generation. CoRR (2024)
Alexander Tong, Kilian Fatras, Nikolay Malkin, Guillaume Huguet, Yanlei Zhang, Jarrid Rector-Brooks, Guy Wolf, Yoshua Bengio
Improving and generalizing flow-based generative models with minibatch optimal transport. Trans. Mach. Learn. Res. 2024 (2024)
Kanika Madan, Jarrid Rector-Brooks, Maksym Korablyov, Emmanuel Bengio, Moksh Jain, Andrei Cristian Nica, Tom Bosc, Yoshua Bengio, Nikolay Malkin
Learning GFlowNets From Partial Episodes For Improved Convergence And Stability. ICML (2023)
Avishek Joey Bose, Tara Akhound-Sadegh, Kilian Fatras, Guillaume Huguet, Jarrid Rector-Brooks, Cheng-Hao Liu, Andrei Cristian Nica, Maksym Korablyov, Michael M. Bronstein, Alexander Tong
SE(3)-Stochastic Flow Matching for Protein Backbone Generation. CoRR (2023)
Moksh Jain, Sharath Chandra Raparthy, Alex Hernández-García, Jarrid Rector-Brooks, Yoshua Bengio, Santiago Miret, Emmanuel Bengio
Multi-Objective GFlowNets. ICML (2023)
Salem Lahlou, Moksh Jain, Hadi Nekoei, Victor Butoi, Paul Bertin, Jarrid Rector-Brooks, Maksym Korablyov, Yoshua Bengio
DEUP: Direct Epistemic Uncertainty Prediction. Trans. Mach. Learn. Res. 2023 (2023)
Alexander Tong, Nikolay Malkin, Guillaume Huguet, Yanlei Zhang, Jarrid Rector-Brooks, Kilian Fatras, Guy Wolf, Yoshua Bengio
Conditional Flow Matching: Simulation-Free Dynamic Optimal Transport. CoRR (2023)
Jarrid Rector-Brooks, Kanika Madan, Moksh Jain, Maksym Korablyov, Cheng-Hao Liu, Sarath Chandar, Nikolay Malkin, Yoshua Bengio
Thompson sampling for improved exploration in GFlowNets. CoRR (2023)
Moksh Jain, Emmanuel Bengio, Alex Hernández-García, Jarrid Rector-Brooks, Bonaventure F. P. Dossou, Chanakya Ajit Ekbote, Jie Fu, Tianyu Zhang, Michael Kilgour, Dinghuai Zhang, Lena Simine, Payel Das, Yoshua Bengio
Biological Sequence Design with GFlowNets. ICML (2022)
Kanika Madan, Jarrid Rector-Brooks, Maksym Korablyov, Emmanuel Bengio, Moksh Jain, Andrei Nica, Tom Bosc, Yoshua Bengio, Nikolay Malkin
Learning GFlowNets from partial episodes for improved convergence and stability. CoRR (2022)
Paul Bertin, Jarrid Rector-Brooks, Deepak Sharma, Thomas Gaudelet, Andrew Anighoro, Torsten Gross, Francisco Martinez-Pena, Eileen L. Tang, Suraj M. S, Cristian Regep, Jeremy B. R. Hayter, Maksym Korablyov, Nicholas Valiante, Almer van der Sloot, Mike Tyers, Charles Roberts, Michael M. Bronstein, Luke L. Lairson, Jake P. Taylor-King, Yoshua Bengio
RECOVER: sequential model optimization platform for combination drug repurposing identifies novel synergistic compounds in vitro. CoRR (2022)
Moksh Jain, Emmanuel Bengio, Alex Hernández-García, Jarrid Rector-Brooks, Bonaventure F. P. Dossou, Chanakya Ekbote, Jie Fu, Tianyu Zhang, Michael Kilgour, Dinghuai Zhang, Lena Simine, Payel Das, Yoshua Bengio
Biological Sequence Design with GFlowNets. CoRR (2022)
Moksh Jain, Sharath Chandra Raparthy, Alex Hernández-García, Jarrid Rector-Brooks, Yoshua Bengio, Santiago Miret, Emmanuel Bengio
Multi-Objective GFlowNets. CoRR (2022)
Moksh Jain, Salem Lahlou, Hadi Nekoei, Victor Butoi, Paul Bertin, Jarrid Rector-Brooks, Maksym Korablyov, Yoshua Bengio
DEUP: Direct Epistemic Uncertainty Prediction. CoRR (2021)
Jarrid Rector-Brooks, Jun-Kun Wang, Barzan Mozafari
Revisiting Projection-Free Optimization for Strongly Convex Constraint Sets. AAAI (2019)
Jarrid Rector-Brooks, Jun-Kun Wang, Barzan Mozafari
Revisiting Projection-Free Optimization for Strongly Convex Constraint Sets. CoRR (2018)