James O. McInerney

Publication Activity (10 Years)

Years Active: 1998-2015
Publications (10 Years): 2

Top Topics

Microarray Gene Expression Data

Comparative Genomics

Regulatory Networks

Top Venues

Publications

Orla Coleman, Ruth Hogan, Nicole McGoldrick, Niamh Rudden, James O. McInerney
Evolution by Pervasive Gene Fusion in Antibiotic Resistance and Antibiotic Synthesizing Genes. Comput. 3 (2) (2015)
Chuan Ku, Shijulal Nelson-Sathi, Mayo Roettger, Filipa L. Sousa, Peter J. Lockhart, David Bryant, Einat Hazkani-Covo, James O. McInerney, Giddy Landan, William F. Martin
Endosymbiotic origin and differential loss of eukaryotic genes. Nat. 524 (7566) (2015)
Pere Puigbò, Santiago Garcia-Vallvé, James O. McInerney
TOPD/FMTS: a new software to compare phylogenetic trees. Bioinform. 23 (12) (2007)
Thomas M. Keane, Thomas J. Naughton, James O. McInerney
MultiPhyl: a high-throughput phylogenomics webserver using distributed computing. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Thomas M. Keane, Andrew J. Page, Thomas J. Naughton, Simon A. A. Travers, James O. McInerney
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines. Algorithmica 45 (3) (2006)
Thomas M. Keane, Andrew J. Page, James O. McInerney, Thomas J. Naughton
A High-Throughput Bioinformatics Distributed Computing Platform. CBMS (2005)
Thomas M. Keane, Thomas J. Naughton, Simon A. A. Travers, James O. McInerney, Grace P. McCormack
DPRml: distributed phylogeny reconstruction by maximum likelihood. Bioinform. 21 (7) (2005)
C. J. Creevey, James O. McInerney
Clann: investigating phylogenetic information through supertree analyses. Bioinform. 21 (3) (2005)
Shaun Mahony, James O. McInerney, Terry J. Smith, Aaron Golden
Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models. BMC Bioinform. 5 (2004)
Shaun Mahony, Terry J. Smith, James O. McInerney, Aaron Golden
A New Approach to Gene Prediction Using the Self-Organizing Map. CSB (2003)
C. J. Creevey, James O. McInerney
CRANN: detecting adaptive evolution in protein-coding DNA sequences. Bioinform. 19 (13) (2003)
Thomas M. Keane, Richard Allen, Thomas J. Naughton, James O. McInerney, John Waldron
Distributed computing for DNA analysis. PPPJ/IRE (2002)
Thomas M. Keane, Richard Allen, Thomas J. Naughton, James O. McInerney, John Waldron
Distributed Java Platform with Programmable MIMD Capabilities. FIDJI (2002)
James O. McInerney
GCUA: general codon usage analysis. Bioinform. 14 (4) (1998)