Hsuan-Cheng Huang

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 8

Top Topics

Systems Biology

Protein Interaction Networks

Top Venues

Briefings Bioinform.

Nucleic Acids Res.

Publications

Kai-Pu Chen, Chia-Lang Hsu, Yen-Jen Oyang, Hsuan-Cheng Huang, Hsueh-Fen Juan
BIC: a database for the transcriptional landscape of bacteria in cancer. Nucleic Acids Res. 51 (D1) (2023)
Yueh-Hua Tu, Hsueh-Fen Juan, Hsuan-Cheng Huang
Context-dependent gene regulatory network reveals regulation dynamics and cell trajectories using unspliced transcripts. Briefings Bioinform. 24 (2) (2023)
Kuei-Yueh Ko, Cho-Yi Chen, Hsueh-Fen Juan, Hsuan-Cheng Huang
Phylotranscriptomic patterns of network stochasticity and pathway dynamics during embryogenesis. Bioinform. 38 (3) (2022)
Ting-Fu Chen, Yu-Chuan Chang, Yi Hsiao, Ko-Han Lee, Yu-Chun Hsiao, Yu-Hsiang Lin, Yi-Chin Ethan Tu, Hsuan-Cheng Huang, Chien-Yu Chen, Hsueh-Fen Juan
DockCoV2: a drug database against SARS-CoV-2. Nucleic Acids Res. 49 (Database-Issue) (2021)
Chia-Ying Wu, Arthur Chun-Chieh Shih, Hsuan-Cheng Huang, Chun-Ping Yu, Chien-Chang Chen
Refined Prediction of Mouse and Human Actions Based on A Data-Selective Multiple-Stage Approach of 3D Convolutional Neural Networks. TAAI (2020)
Yun-Ru Chen, Hsuan-Cheng Huang, Chen-Ching Lin
Regulatory feedback loops bridge the human gene regulatory network and regulate carcinogenesis. Briefings Bioinform. 20 (3) (2019)
Chia-Lang Hsu, Jiankai Wang, Pei-Chun Lu, Hsuan-Cheng Huang, Hsueh-Fen Juan
DynaPho: a web platform for inferring the dynamics of time-series phosphoproteomics. Bioinform. 33 (22) (2017)
Li-Ling Lin, Hsuan-Cheng Huang, Hsueh-Fen Juan
Circadian systems biology in Metazoa. Briefings Bioinform. 16 (6) (2015)
Ken-Chi Yang, Chia-Lang Hsu, Chen-Ching Lin, Hsueh-Fen Juan, Hsuan-Cheng Huang
Mirin: identifying microRNA regulatory modules in protein-protein interaction networks. Bioinform. 30 (17) (2014)
Szu-Chin Fu, Hsuan-Cheng Huang, Paul Horton, Hsueh-Fen Juan
ValidNESs: a database of validated leucine-rich nuclear export signals. Nucleic Acids Res. 41 (Database-Issue) (2013)
Cho-Yi Chen, Shui-Tein Chen, Hsueh-Fen Juan, Hsuan-Cheng Huang
Lengthening of 3′UTR increases with morphological complexity in animal evolution. Bioinform. 28 (24) (2012)
Chen-Ching Lin, Ya-Jen Chen, Cho-Yi Chen, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang
Crosstalk between transcription factors and microRNAs in human protein interaction network. BMC Syst. Biol. 6 (2012)
Chien-Wei Tseng, Chen-Ching Lin, Chiung-Nien Chen, Hsuan-Cheng Huang, Hsueh-Fen Juan
Integrative network analysis reveals active microRNAs and their functions in gastric cancer. BMC Syst. Biol. 5 (2011)
Yu-Cheng Liu, Po-I Chiu, Hsuan-Cheng Huang, Vincent S. Tseng
Prediction of Essential Genes by Mining Gene Ontology Semantics. ISBRA (2011)
Cho-Yi Chen, Shui-Tein Chen, Chiou-Shann Fuh, Hsueh-Fen Juan, Hsuan-Cheng Huang
Coregulation of transcription factors and microRNAs in human transcriptional regulatory network. BMC Bioinform. 12 (S-1) (2011)
Timothy H. Wu, Ian Chang, Lichieh Julie Chu, Hsuan-Cheng Huang, Wailap V. Ng
Modularity of Escherichia coli sRNA regulation revealed by sRNA-target and protein network analysis. BMC Bioinform. 11 (S-7) (2010)
Chen-Ching Lin, Jen-Tsung Hsiang, Chia-Yi Wu, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang
Dynamic functional modules in co-expressed protein interaction networks of dilated cardiomyopathy. BMC Syst. Biol. 4 (2010)
Yu-Ching Fang, Hsuan-Cheng Huang, Hsueh-Fen Juan
MeInfoText: associated gene methylation and cancer information from text mining. BMC Bioinform. 9 (2008)
Tzong-Yi Lee, Jorng-Tzong Horng, Hsueh-Fen Juan, Hsien-Da Huang, Li-Cheng Wu, Meng-Feng Tsai, Hsuan-Cheng Huang
An agent-based system to discover protein-protein interactions, identify protein complexes and proteins with multiple peptide mass fingerprints. J. Comput. Chem. 27 (9) (2006)
Chia-Chin Wu, Hsuan-Cheng Huang, Hsueh-Fen Juan, Shui-Tein Chen
GeneNetwork: an interactive tool for reconstruction of genetic networks using microarray data. Bioinform. 20 (18) (2004)
Darby Tien-Hao Chang, Chien-Yu Chen, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang
An Efficient Mechanism for Prediction of Protein-Ligand Interactions Based on Analysis of Protein Tertiary Substructures. BIBE (2004)
Darby Tien-Hao Chang, Chien-Yu Chen, Wen-Chin Chung, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang
ProteMiner-SSM: a web server for efficient analysis of similar protein tertiary substructures. Nucleic Acids Res. 32 (Web-Server-Issue) (2004)