Modularity of Escherichia coli sRNA regulation revealed by sRNA-target and protein network analysis.
Timothy H. WuIan ChangLichieh Julie ChuHsuan-Cheng HuangWailap V. NgPublished in: BMC Bioinform. (2010)
Keyphrases
- network analysis
- expression profiles
- protein protein interactions
- regulatory networks
- escherichia coli
- gene expression
- microarray
- community detection
- saccharomyces cerevisiae
- genome wide
- social network analysis
- high throughput
- transcription factors
- complex networks
- gene expression data
- protein interaction
- link prediction
- biological processes
- network structure
- gene ontology
- text mining
- biomedical literature
- protein complexes
- gene regulation
- biological networks
- systems biology
- microarray data
- high dimensionality
- biological data
- functional modules
- genomic data
- social networks
- experimental conditions
- protein interaction networks
- gene networks
- signaling pathways
- community structure
- mass spectrometry
- gene expression profiles
- binding sites
- gene selection
- graph theory
- information retrieval
- regulatory elements