Guillem Rigaill

Publication Activity (10 Years)

Years Active: 2008-2023
Publications (10 Years): 11

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Similarity Matrix

Top Venues

Briefings Bioinform.

J. Stat. Softw.

J. Mach. Learn. Res.

Publications

Martina Sundqvist, Julien Chiquet, Guillem Rigaill
Adjusting the adjusted Rand Index. Comput. Stat. 38 (1) (2023)
Vincent Runge, Toby Dylan Hocking, Gaetano Romano, Fatemeh Afghah, Paul Fearnhead, Guillem Rigaill
Package for Univariate Graph-Constrained Change-Point Detection. J. Stat. Softw. 106 (6) (2023)
Gaetano Romano, Idris A. Eckley, Paul Fearnhead, Guillem Rigaill
Fast Online Changepoint Detection via Functional Pruning CUSUM Statistics. J. Mach. Learn. Res. 24 (2023)
Toby Dylan Hocking, Guillem Rigaill, Paul Fearnhead, Guillaume Bourque
Generalized Functional Pruning Optimal Partitioning (GFPOP) for Constrained Changepoint Detection in Genomic Data. J. Stat. Softw. 101 (10) (2022)
Arnaud Liehrmann, Guillem Rigaill, Toby Dylan Hocking
Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models. BMC Bioinform. 22 (1) (2021)
Toby Dylan Hocking, Guillem Rigaill, Paul Fearnhead, Guillaume Bourque
Constrained Dynamic Programming and Supervised Penalty Learning Algorithms for Peak Detection in Genomic Data. J. Mach. Learn. Res. 21 (2020)
Audrey Hulot, Julien Chiquet, Florence Jaffrézic, Guillem Rigaill
Fast tree aggregation for consensus hierarchical clustering. BMC Bioinform. 21 (1) (2020)
Christophe Ambroise, Alia Dehman, Pierre Neuvial, Guillem Rigaill, Nathalie Villa-Vialaneix
Adjacency-constrained hierarchical clustering of a band similarity matrix with application to genomics. Algorithms Mol. Biol. 14 (1) (2019)
Alain Celisse, Guillemette Marot, Morgane Pierre-Jean, Guillem Rigaill
New efficient algorithms for multiple change-point detection with reproducing kernels. Comput. Stat. Data Anal. 128 (2018)
Guillem Rigaill, Sandrine Balzergue, Véronique Brunaud, Eddy Blondet, Andrea Rau, Odile Rogier, José Caius, Cathy Maugis-Rabusseau, Ludivine Taconnat, Sébastien Aubourg, Claire Lurin, Marie-Laure Martin-Magniette, Etienne Delannoy
Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis. Briefings Bioinform. 19 (1) (2018)
Robert Maidstone, Toby Hocking, Guillem Rigaill, Paul Fearnhead
On optimal multiple changepoint algorithms for large data. Stat. Comput. 27 (2) (2017)
Rim Zaag, Jean-Philippe Tamby, Cécile Guichard, Zakia Tariq, Guillem Rigaill, Etienne Delannoy, Jean-Pierre Renou, Sandrine Balzergue, Tristan Mary-Huard, Sébastien Aubourg, Marie-Laure Martin-Magniette, Véronique Brunaud
genes involved in stress response. Nucleic Acids Res. 43 (Database-Issue) (2015)
Toby Hocking, Guillem Rigaill, Guillaume Bourque
PeakSeg: constrained optimal segmentation and supervised penalty learning for peak detection in count data. ICML (2015)
Morgane Pierre-Jean, Guillem Rigaill, Pierre Neuvial
Performance evaluation of DNA copy number segmentation methods. Briefings Bioinform. 16 (4) (2015)
Alice Cleynen, Michel Koskas, Emilie Lebarbier, Guillem Rigaill, Stéphane Robin
Segmentor3IsBack: an R package for the fast and exact segmentation of Seq-data. Algorithms Mol. Biol. 9 (2014)
Toby Dylan Hocking, Valentina Boeva, Guillem Rigaill, Gudrun Schleiermacher, Isabelle Janoueix-Lerosey, Olivier Delattre, Wilfrid Richer, Franck Bourdeaut, Miyuki Suguro, Masao Seto, Francis R. Bach, Jean-Philippe Vert
SegAnnDB: interactive Web-based genomic segmentation. Bioinform. 30 (11) (2014)
Alice Cleynen, The Minh Luong, Guillem Rigaill, Grégory Nuel
Fast estimation of the Integrated Completed Likelihood criterion for change-point detection problems with applications to Next-Generation Sequencing data. Signal Process. 98 (2014)
Toby Hocking, Guillem Rigaill, Jean-Philippe Vert, Francis R. Bach
Learning Sparse Penalties for Change-point Detection using Max Margin Interval Regression. ICML (3) (2013)
Guillem Rigaill, Vincent Miele, Franck Picard
Fast and Parallel Algorithm for Population-Based Segmentation of Copy-Number Profiles. CIBB (2013)
Guillem Rigaill, Sidney Cadot, Roelof J. C. Kluin, Zheng Xue, René Bernards, Ian J. Majewski, Lodewyk F. A. Wessels
A regression model for estimating DNA copy number applied to capture sequencing data. Bioinform. 28 (18) (2012)
Guillem Rigaill, Emilie Lebarbier, Stéphane Robin
Exact posterior distributions and model selection criteria for multiple change-point detection problems. Stat. Comput. 22 (4) (2012)
Guillem Rigaill, Emilie Lebarbier, Stéphane Robin
Exact Posterior Distributions over the Segmentation Space and Model Selection for Multiple Change-Point Detection Problems. COMPSTAT (2010)
Guillem Rigaill, Philippe Hupé, Anna Almeida, Philippe La Rosa, Jean-Philippe Meyniel, Charles Decraene, Emmanuel Barillot
ITALICS: an algorithm for normalization and DNA copy number calling for Affymetrix SNP arrays. Bioinform. 24 (6) (2008)