Gergely Csaba

Publication Activity (10 Years)

Years Active: 2007-2021
Publications (10 Years): 5

Top Venues

BMC Bioinform.

Bioinform.

Briefings Bioinform.

Database J. Biol. Databases Curation

Ludwig Maximilians University Munich (PHD)

Education History

Ludwig Maximilians University Munich

PHD

Publications

Ludwig Geistlinger, Gergely Csaba, Mara Santarelli, Marcel Ramos, Lucas Schiffer, Nitesh Turaga, Charity W. Law, Sean Davis, Vincent J. Carey, Martin Morgan, Ralf Zimmer, Levi Waldron
Toward a gold standard for benchmarking gene set enrichment analysis. Briefings Bioinform. 22 (1) (2021)
Evi Berchtold, Martina Vetter, Melanie Gündert, Gergely Csaba, Christine Fathke, Susanne E. Ulbrich, Christoph Thomssen, Ralf Zimmer, Eva J. Kantelhardt
Comparison of six breast cancer classifiers using qPCR. Bioinform. 35 (18) (2019)
Evi Berchtold, Gergely Csaba, Ralf Zimmer
YESdb: integrative analysis of environmental stress in yeast. Database J. Biol. Databases Curation 2019 (2019)
Evi Berchtold, Gergely Csaba, Ralf Zimmer
RelExplain - integrating data and networks to explain biological processes. Bioinform. 33 (12) (2017)
Ludwig Geistlinger, Gergely Csaba, Ralf Zimmer
Bioconductor's EnrichmentBrowser: seamless navigation through combined results of set- & network-based enrichment analysis. BMC Bioinform. 17 (2016)
Thomas Bonfert, Evelyn Kirner, Gergely Csaba, Ralf Zimmer, Caroline C. Friedel
ContextMap 2: fast and accurate context-based RNA-seq mapping. BMC Bioinform. 16 (2015)
Thomas Bonfert, Gergely Csaba, Ralf Zimmer, Caroline C. Friedel
A context-based approach to identify the most likely mapping for RNA-seq experiments. BMC Bioinform. 13 (S-6) (2012)
Ludwig Geistlinger, Gergely Csaba, Robert Küffner, Nicola J. Mulder, Ralf Zimmer
From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems. Bioinform. 27 (13) (2011)
Gergely Csaba, Ralf Zimmer
Vorescore - fold recognition improved by rescoring of protein structure models. Bioinform. 26 (18) (2010)
Haroon Naeem, Robert Küffner, Gergely Csaba, Ralf Zimmer
miRSel: Automated extraction of associations between microRNAs and genes from the biomedical literature. BMC Bioinform. 11 (2010)
Fabian Birzele, Gergely Csaba, Florian Erhard, Caroline C. Friedel, Robert Küffner, Tobias Petri, Lukas Windhager, Ralf Zimmer
Algorithmische Systembiologie mit Petrinetzen - Von qualitativen zu quantitativen Systemmodellen. Inform. Spektrum 32 (4) (2009)
Gergely Csaba, Fabian Birzele, Ralf Zimmer
Protein structure alignment considering phenotypic plasticity. ECCB (2008)
Fabian Birzele, Jan E. Gewehr, Gergely Csaba, Ralf Zimmer
Vorolign - fast structural alignment using Voronoi contacts. Bioinform. 23 (2) (2007)

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Publication Activity (10 Years)

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Gergely Csaba