Frauke Wilm

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 35

Top Topics

Histopathology Images

Diffusion Models

Top Venues

Bildverarbeitung für die Medizin

Medical Image Anal.

Publications

Jingna Qiu, Marc Aubreville, Frauke Wilm, Mathias Öttl, Jonas Utz, Maja Schlereth, Katharina Breininger
Leveraging image captions for selective whole slide image annotation. CoRR (2024)
Frauke Wilm, Jonas Ammeling, Mathias Öttl, Rutger H. J. Fick, Marc Aubreville, Katharina Breininger
Rethinking U-net Skip Connections for Biomedical Image Segmentation. CoRR (2024)
Marc Aubreville, Frauke Wilm, Nikolas Stathonikos, Katharina Breininger, Taryn A. Donovan, Samir Jabari, Robert Klopfleisch, Mitko Veta, Jonathan Ganz, Jonas Ammeling, Paul J. van Diest, Christof A. Bertram
Abstract: Comprehensive Multi-domain Dataset for Mitotic Figure Detection. Bildverarbeitung für die Medizin (2024)
Marc Aubreville, Nikolas Stathonikos, Taryn A. Donovan, Robert Klopfleisch, Jonas Ammeling, Jonathan Ganz, Frauke Wilm, Mitko Veta, Samir Jabari, Markus Eckstein, Jonas Annuscheit, Christian Krumnow, Engin Bozaba, Sercan Çayir, Hongyan Gu, Xiang Anthony Chen, Mostafa Jahanifar, Adam Shephard, Satoshi Kondo, Satoshi Kasai, Sujatha Kotte, VG Saipradeep, Maxime W. Lafarge, Viktor H. Koelzer, Ziyue Wang, Yongbing Zhang, Sen Yang, Xiyue Wang, Katharina Breininger, Christof A. Bertram
Domain generalization across tumor types, laboratories, and species - Insights from the 2022 edition of the Mitosis Domain Generalization Challenge. Medical Image Anal. 94 (2024)
Jingna Qiu, Frauke Wilm, Mathias Öttl, Maja Schlereth, Chang Liu, Tobias Heimann, Marc Aubreville, Katharina Breininger
Abstract: Adaptive Region Selection for Active Learning in Whole Slide Image Semantic Segmentation. Bildverarbeitung für die Medizin (2024)
Frauke Wilm, Marcel Reimann, Oliver Taubmann, Alexander Mühlberg, Katharina Breininger
Appearance-based Debiasing of Deep Learning Models in Medical Imaging. Bildverarbeitung für die Medizin (2024)
Mathias Öttl, Frauke Wilm, Jana Steenpass, Jingna Qiu, Matthias Rübner, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas K. Maier, Ramona Erber, Bernhard Kainz, Katharina Breininger
Style-Extracting Diffusion Models for Semi-Supervised Histopathology Segmentation. CoRR (2024)
Mathias Öttl, Siyuan Mei, Frauke Wilm, Jana Steenpass, Matthias Rübner, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas K. Maier, Ramona Erber, Katharina Breininger
Analysing Diffusion Segmentation for Medical Images. CoRR (2024)
Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville
Multi-scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology Dataset. Bildverarbeitung für die Medizin (2023)
Jingna Qiu, Frauke Wilm, Mathias Öttl, Maja Schlereth, Chang Liu, Tobias Heimann, Marc Aubreville, Katharina Breininger
Adaptive Region Selection for Active Learning in Whole Slide Image Semantic Segmentation. MICCAI (2) (2023)
Frauke Wilm, Marco Fragoso, Christian Marzahl, Jingna Qiu, Chloé Puget, Laura Diehl, Christof A. Bertram, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville
Abstract: Pan-tumor CAnine CuTaneous Cancer Histology (CATCH) Dataset. Bildverarbeitung für die Medizin (2023)
Marc Aubreville, Nikolas Stathonikos, Taryn A. Donovan, Robert Klopfleisch, Jonathan Ganz, Jonas Ammeling, Frauke Wilm, Mitko Veta, Samir Jabari, Markus Eckstein, Jonas Annuscheit, Christian Krumnow, Engin Bozaba, Sercan Cayir, Hongyan Gu, Xiang 'Anthony' Chen, Mostafa Jahanifar, Adam Shephard, Satoshi Kondo, Satoshi Kasai, Sujatha Kotte, VG Saipradeep, Maxime W. Lafarge, Viktor H. Koelzer, Ziyue Wang, Yongbing Zhang, Sen Yang, Xiyue Wang, Katharina Breininger, Christof A. Bertram
Domain generalization across tumor types, laboratories, and species - insights from the 2022 edition of the Mitosis Domain Generalization Challenge. CoRR (2023)
Jingna Qiu, Frauke Wilm, Mathias Öttl, Maja Schlereth, Chang Liu, Tobias Heimann, Marc Aubreville, Katharina Breininger
Adaptive Region Selection for Active Learning in Whole Slide Image Semantic Segmentation. CoRR (2023)
Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville
Multi-Scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology Dataset. CoRR (2023)
Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Mitko Veta, Katharina Breininger
Abstract: the MIDOG Challenge 2021 - Mitosis Domain Generalization in Histopathology Images. Bildverarbeitung für die Medizin (2023)
Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Jack Breen, Nishant Ravikumar, Youjin Chung, Jinah Park, Ramin Nateghi, Fattaneh Pourakpour, Rutger H. J. Fick, Saima Ben Hadj, Mostafa Jahanifar, Adam Shephard, Jakob Dexl, Thomas Wittenberg, Satoshi Kondo, Maxime W. Lafarge, Viktor H. Koelzer, Jingtang Liang, Yubo Wang, Xi Long, Jingxin Liu, Salar Razavi, April Khademi, Sen Yang, Xiyue Wang, Ramona Erber, Andrea Klang, Karoline Lipnik, Pompei Bolfa, Michael J. Dark, Gabriel Wasinger, Mitko Veta, Katharina Breininger
Mitosis domain generalization in histopathology images - The MIDOG challenge. Medical Image Anal. 84 (2023)
Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas Maier, Marc Aubreville, Katharina Breininger
Mind the Gap: Scanner-Induced Domain Shifts Pose Challenges for Representation Learning in Histopathology. ISBI (2023)
Mathias Öttl, Jana Steenpass, Matthias Rübner, Carol I. Geppert, Jingna Qiu, Frauke Wilm, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas Maier, Ramona Erber, Katharina Breininger
Improved HER2 Tumor Segmentation with Subtype Balancing Using Deep Generative Networks. ISBI (2023)
Frauke Wilm, Marco Fragoso, Christian Marzahl, Jingna Qiu, Christof A. Bertram, Robert Klopfleisch, Andreas K. Maier, Katharina Breininger, Marc Aubreville
Pan-Tumor CAnine cuTaneous Cancer Histology (CATCH) Dataset. CoRR (2022)
Mathias Öttl, Jana Mönius, Matthias Rübner, Carol I. Geppert, Jingna Qiu, Frauke Wilm, Arndt Hartmann, Matthias W. Beckmann, Peter A. Fasching, Andreas K. Maier, Ramona Erber, Katharina Breininger
Improved HER2 Tumor Segmentation with Subtype Balancing using Deep Generative Networks. CoRR (2022)
Marc Aubreville, Nikolas Stathonikos, Christof A. Bertram, Robert Klopfleisch, Natalie D. ter Hoeve, Francesco Ciompi, Frauke Wilm, Christian Marzahl, Taryn A. Donovan, Andreas K. Maier, Jack Breen, Nishant Ravikumar, Youjin Chung, Jinah Park, Ramin Nateghi, Fattaneh Pourakpour, Rutger H. J. Fick, Saima Ben Hadj, Mostafa Jahanifar, Nasir M. Rajpoot, Jakob Dexl, Thomas Wittenberg, Satoshi Kondo, Maxime W. Lafarge, Viktor H. Koelzer, Jingtang Liang, Yubo Wang, Xi Long, Jingxin Liu, Salar Razavi, April Khademi, Sen Yang, Xiyue Wang, Mitko Veta, Katharina Breininger
Mitosis domain generalization in histopathology images - The MIDOG challenge. CoRR (2022)
Jonas Ammeling, Frauke Wilm, Jonathan Ganz, Katharina Breininger, Marc Aubreville
Reference Algorithms for the Mitosis Domain Generalization (MIDOG) 2022 Challenge. MIDOG/DRAC@MICCAI (2022)
Frauke Wilm, Marco Fragoso, Christof A. Bertram, Nikolas Stathonikos, Mathias Öttl, Jingna Qiu, Robert Klopfleisch, Andreas K. Maier, Marc Aubreville, Katharina Breininger
Mind the Gap: Scanner-induced domain shifts pose challenges for representation learning in histopathology. CoRR (2022)
Frauke Wilm, Michaela Benz, Volker Bruns, Serop Baghdadlian, Jakob Dexl, David Hartmann, Petr Kuritcyn, Martin Weidenfeller, Thomas Wittenberg, Susanne Merkel, Arndt Hartmann, Markus Eckstein, Carol I. Geppert
Fast whole-slide cartography in colon cancer histology using superpixels and CNN classification. CoRR (2021)
Luisa Theelke, Frauke Wilm, Christian Marzahl, Christof A. Bertram, Robert Klopfleisch, Andreas Maier, Marc Aubreville, Katharina Breininger
Iterative Cross-Scanner Registration for Whole Slide Images. ICCVW (2021)
Frauke Wilm, Katharina Breininger, Marc Aubreville
Domain Adversarial RetinaNet as a Reference Algorithm for the MItosis DOmain Generalization (MIDOG) Challenge. CoRR (2021)
Christian Marzahl, Jenny Hill, Jason Stayt, Dorothee Bienzle, Lutz Welker, Frauke Wilm, Jörn Voigt, Marc Aubreville, Andreas K. Maier, Robert Klopfleisch, Katharina Breininger, Christof A. Bertram
Inter-Species Cell Detection: Datasets on pulmonary hemosiderophages in equine, human and feline specimens. CoRR (2021)
Frauke Wilm, Christian Marzahl, Katharina Breininger, Marc Aubreville
Domain Adversarial RetinaNet as a Reference Algorithm for the MItosis DOmain Generalization Challenge. MIDOG/MOOD/Learn2Reg@MICCAI (2021)
Christian Marzahl, Christof A. Bertram, Frauke Wilm, Jörn Voigt, Ann K. Barton, Robert Klopfleisch, Katharina Breininger, Andreas Maier, Marc Aubreville
Learning to be EXACT, Cell Detection for Asthma on Partially Annotated Whole Slide Images. CoRR (2021)
Frauke Wilm, Christof A. Bertram, Christian Marzahl, Alexander Bartel, Taryn A. Donovan, Charles-Antoine Assenmacher, Kathrin Becker, Mark Bennett, Sarah Corner, Brieuc Cossic, Daniela Denk, Martina Dettwiler, Beatriz Garcia Gonzalez, Corinne Gurtner, Annabelle Heier, Annika Lehmbecker, Sophie Merz, Stephanie Plog, Anja Schmidt, Franziska Sebastian, Rebecca C. Smedley, Marco Tecilla, Tuddow Thaiwong, Katharina Breininger, Matti Kiupel, Andreas Maier, Robert Klopfleisch, Marc Aubreville
Influence of Inter-Annotator Variability on Automatic Mitotic Figure Assessment. Bildverarbeitung für die Medizin (2021)
Christian Marzahl, Christof A. Bertram, Frauke Wilm, Jörn Voigt, Ann K. Barton, Robert Klopfleisch, Katharina Breininger, Andreas Maier, Marc Aubreville
Cell Detection for Asthma on Partially Annotated Whole Slide Images - Learning to be EXACT. Bildverarbeitung für die Medizin (2021)
Christian Marzahl, Frauke Wilm, Franz F. Dressler, Lars Tharun, Sven Perner, Christof A. Bertram, Christine Kröger, Jörn Voigt, Robert Klopfleisch, Andreas K. Maier, Marc Aubreville, Katharina Breininger
Robust Quad-Tree based Registration on Whole Slide Images. COMPAY@MICCAI (2021)
Christof A. Bertram, Taryn A. Donovan, Marco Tecilla, Florian Bartenschlager, Marco Fragoso, Frauke Wilm, Christian Marzahl, Katharina Breininger, Andreas Maier, Robert Klopfleisch, Marc Aubreville
Dataset on Bi- and Multi-nucleated Tumor Cells in Canine Cutaneous Mast Cell Tumors. Bildverarbeitung für die Medizin (2021)
Christof A. Bertram, Taryn A. Donovan, Marco Tecilla, Florian Bartenschlager, Marco Fragoso, Frauke Wilm, Christian Marzahl, Katharina Breininger, Andreas Maier, Robert Klopfleisch, Marc Aubreville
Dataset on Bi- and Multi-Nucleated Tumor Cells in Canine Cutaneous Mast Cell Tumors. CoRR (2021)
Frauke Wilm, Christof A. Bertram, Christian Marzahl, Alexander Bartel, Taryn A. Donovan, Charles-Antoine Assenmacher, Kathrin Becker, Mark Bennett, Sarah Corner, Brieuc Cossic, Daniela Denk, Martina Dettwiler, Beatriz Garcia Gonzalez, Corinne Gurtner, Annika Lehmbecker, Sophie Merz, Stephanie Plog, Anja Schmidt, Rebecca C. Smedley, Marco Tecilla, Tuddow Thaiwong, Katharina Breininger, Matti Kiupel, Andreas Maier, Robert Klopfleisch, Marc Aubreville
How Many Annotators Do We Need? - A Study on the Influence of Inter-Observer Variability on the Reliability of Automatic Mitotic Figure Assessment. CoRR (2020)