Dannie Durand

Publication Activity (10 Years)

Years Active: 1993-2021
Publications (10 Years): 4

Top Topics

Benchmark Data Sets

Temporal Relations

Evidence Theory

Top Venues

J. Bioinform. Comput. Biol.

Publications

Xiaoyue Cui, Maureen Stolzer, Dannie Durand
Evidence for exon shuffling is sensitive to model choice. J. Bioinform. Comput. Biol. 19 (6) (2021)
Charlotte A. Darby, Maureen Stolzer, Patrick J. Ropp, Daniel Barker, Dannie Durand
Xenolog classification. Bioinform. 33 (5) (2017)
Han Lai, Maureen Stolzer, Dannie Durand
Fast Heuristics for Resolving Weakly Supported Branches Using Duplication, Transfers, and Losses. RECOMB-CG (2017)
Maureen Stolzer, Katherine Siewert, Han Lai, Minli Xu, Dannie Durand
Event inference in multidomain families with phylogenetic reconciliation. BMC Bioinform. 16 (S14) (2015)
Maureen Stolzer, Han Lai, Minli Xu, Deepa Sathaye, Benjamin Vernot, Dannie Durand
Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees. Bioinform. 28 (18) (2012)
Jacob M. Joseph, Dannie Durand
Family classification without domain chaining. Bioinform. 25 (12) (2009)
Benjamin Vernot, Maureen Stolzer, Aiton Goldman, Dannie Durand
Reconciliation with Non-Binary Species Trees. J. Comput. Biol. 15 (8) (2008)
Nan Song, Jacob M. Joseph, George B. Davis, Dannie Durand
Sequence Similarity Network Reveals Common Ancestry of Multidomain Proteins. PLoS Comput. Biol. 4 (5) (2008)
Narayanan Raghupathy, Rose Hoberman, Dannie Durand
Two Plus Two Does not Equal Three: Statistical Tests for Multiple genome Comparison. J. Bioinform. Comput. Biol. 6 (1) (2008)
Glenn Tesler, Dannie Durand
Preface. J. Comput. Biol. 15 (8) (2008)
Narayanan Raghupathy, Rose Hoberman, Dannie Durand
Two Plus Two Does not Equal Three: Statistical Tests for Multiple Genome Comparison. APBC (2007)
Nan Song, R. D. Sedgewick, Dannie Durand
Domain Architecture Comparison for Multidomain Homology Identification. J. Comput. Biol. 14 (4) (2007)
Teresa M. Przytycka, George B. Davis, Nan Song, Dannie Durand
Graph Theoretical Insights into Evolution of Multidomain Proteins. J. Comput. Biol. 13 (2) (2006)
Nan Song, R. D. Sedgewick, Dannie Durand
Domain Architecture in Homolog Identification. Comparative Genomics (2006)
Dannie Durand, Bjarni V. Halldórsson, Benjamin Vernot
A Hybrid Micro-Macroevolutionary Approach to Gene Tree Reconstruction. J. Comput. Biol. 13 (2) (2006)
Rose Hoberman, Dannie Durand
The Incompatible Desiderata of Gene Cluster Properties. Comparative Genomics (2005)
Teresa M. Przytycka, George B. Davis, Nan Song, Dannie Durand
Graph Theoretical Insights into Evolution of Multidomain Proteins. RECOMB (2005)
Rose Hoberman, David Sankoff, Dannie Durand
The Statistical Analysis of Spatially Clustered Genes under the Maximum Gap Criterion. J. Comput. Biol. 12 (8) (2005)
Dannie Durand, Bjarni V. Halldórsson, Benjamin Vernot
A Hybrid Micro-Macroevolutionary Approach to Gene Tree Reconstruction. RECOMB (2005)
Narayanan Raghupathy, Dannie Durand
Individual Gene Cluster Statistics in Noisy Maps. Comparative Genomics (2005)
Rose Hoberman, David Sankoff, Dannie Durand
The Statistical Significance of Max-Gap Clusters. Comparative Genomics (2004)
Dannie Durand, David Sankoff
Tests for Gene Clustering. J. Comput. Biol. 10 (3/4) (2003)
Dannie Durand, Ravi Jain, David Tseytlin
Parallel I/O scheduling using randomized, distributed edge coloring algorithms. J. Parallel Distributed Comput. 63 (6) (2003)
Dannie Durand, David Sankoff
Tests for gene clustering. RECOMB (2002)
Kevin C. Chen, Dannie Durand, Martin Farach-Colton
NOTUNG: A Program for Dating Gene Duplications and Optimizing Gene Family Trees. J. Comput. Biol. 7 (3-4) (2000)
Kevin C. Chen, Dannie Durand, Martin Farach-Colton
Notung: dating gene duplications using gene family trees. RECOMB (2000)
Dannie Durand
A new look at tree models for multiple sequence alignment. Mathematical Support for Molecular Biology (1998)
Dannie Durand, Thierry Montaut, Lionel Kervella, William Jalby
Impact of Memory Contention on Dynamic Scheduling on NUMA Multiprocessors. IEEE Trans. Parallel Distributed Syst. 7 (11) (1996)
Dannie Durand, Ravi Jain, David Tseytlin
Applying Randomized Edge Coloring Algorithms to Distributed Communication: An Experimental Study. SPAA (1995)
Dannie Durand, Ravi Jain, David Tseytlin
Distributed scheduling algorithms to improve the performance of parallel data transfers. SIGARCH Comput. Archit. News 22 (4) (1994)
Dannie Durand, Thierry Montaut, Lionel Kervella, William Jalby
Impact of Memory Contention on Dynamic Scheduling on NUMA Multiprocessors. ICPP (1) (1993)