Corey W. Arnold

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 68

Top Topics

Ischemic Stroke

Histological Images

Top Venues

IEEE J. Biomed. Health Informatics

J. Am. Medical Informatics Assoc.

Publications

Nithin Parthasarathy, James Soetedjo, Saarang Panchavati, Nitya Parthasarathy, Corey W. Arnold, Nader Pouratian, William Speier
High Performance P300 Spellers Using GPT2 Word Prediction With Cross-Subject Training. CoRR (2024)
Ashwath Radhachandran, Adam Kinzel, Joseph Chen, Vivek Sant, Maitraya Patel, Rinat Masamed, Corey W. Arnold, William Speier
A multitask approach for automated detection and segmentation of thyroid nodules in ultrasound images. Comput. Biol. Medicine 170 (2024)
Haoyue Zhang, Jennifer S. Polson, Eric J. Yang, Kambiz Nael, William Speier, Corey W. Arnold
Predicting Thrombectomy Recanalization from CT Imaging Using Deep Learning Models. CoRR (2023)
Saarang Panchavati, Samuel Vander Dussen, Hemal Semwal, Ahmed Ali, Justin Chen, Haoran Li, Corey W. Arnold, William Speier
Pretrained Transformers for Seizure Detection. ICASSP (2023)
Minghui Zhang, Yangqian Wu, Hanxiao Zhang, Yulei Qin, Hao Zheng, Wen Tang, Corey W. Arnold, Chenhao Pei, Pengxin Yu, Yang Nan, Guang Yang, Simon Walsh, Dominic C. Marshall, Matthieu Komorowski, Puyang Wang, Dazhou Guo, Dakai Jin, Yanan Wu, Shuiqing Zhao, Runsheng Chang, Boyu Zhang, Xing Lu, Abdul Qayyum, Moona Mazher, Qi Su, Yonghuang Wu, Ying'ao Liu, Yufei Zhu, Jiancheng Yang, Ashkan Pakzad, Bojidar Rangelov, Raúl San José Estépar, Carlos Cano-Espinosa, Jiayuan Sun, Guang-Zhong Yang, Yun Gu
Multi-site, Multi-domain Airway Tree Modeling. Medical Image Anal. 90 (2023)
Chao Chen, Catalina Raymond, William Speier, Xinyu Jin, Timothy F. Cloughesy, Dieter R. Enzmann, Benjamin M. Ellingson, Corey W. Arnold
Synthesizing MR Image Contrast Enhancement Using 3D High-Resolution ConvNets. IEEE Trans. Biomed. Eng. 70 (2) (2023)
Mara Pleasure, Ekaterina Redekop, Jennifer S. Polson, Haoyue Zhang, Naoki Kaneko, William Speier, Corey W. Arnold
Pathology-Based Ischemic Stroke Etiology Classification via Clot Composition Guided Multiple Instance Learning. ICCV (Workshops) (2023)
Minghui Zhang, Yangqian Wu, Hanxiao Zhang, Yulei Qin, Hao Zheng, Wen Tang, Corey W. Arnold, Chenhao Pei, Pengxin Yu, Yang Nan, Guang Yang, Simon Walsh, Dominic C. Marshall, Matthieu Komorowski, Puyang Wang, Dazhou Guo, Dakai Jin, Yanan Wu, Shuiqing Zhao, Runsheng Chang, Boyu Zhang, Xing Lv, Abdul Qayyum, Moona Mazher, Qi Su, Yonghuang Wu, Ying'ao Liu, Yufei Zhu, Jiancheng Yang, Ashkan Pakzad, Bojidar Rangelov, Raúl San José Estépar, Carlos Cano-Espinosa, Jiayuan Sun, Guang-Zhong Yang, Yun Gu
Multi-site, Multi-domain Airway Tree Modeling (ATM'22): A Public Benchmark for Pulmonary Airway Segmentation. CoRR (2023)
Shreeram Athreya, Ashwath Radhachandran, Vedrana Ivezic, Vivek Sant, Corey W. Arnold, William Speier
Ultrasound Image Enhancement using CycleGAN and Perceptual Loss. CoRR (2023)
Zichen Wang, Mara Pleasure, Haoyue Zhang, Kimberly Flores, Anthony Sisk, William Speier, Corey W. Arnold
Deep Learning for Tumor-Associated Stroma Identification in Prostate Histopathology Slides. MICCAI (6) (2023)
Kexin Ding, Mu Zhou, Zichen Wang, Qiao Liu, Corey W. Arnold, Shaoting Zhang, Dimitris N. Metaxas
Graph Convolutional Networks for Multi-modality Medical Imaging: Methods, Architectures, and Clinical Applications. CoRR (2022)
Whitney Arnold, Corey W. Arnold
: Revealing public medical discourse with topic modelling. Digit. Scholarsh. Humanit. 37 (3) (2022)
Justin Wood, Corey W. Arnold, Wei Wang
Knowledge Source Rankings for Semi-Supervised Topic Modeling. Inf. 13 (2) (2022)
Wen Tang, Han Kang, Haoyue Zhang, Pengxin Yu, Corey W. Arnold, Rongguo Zhang
Transformer Lesion Tracker. CoRR (2022)
Wenyuan Li, Jiayun Li, Zichen Wang, Jennifer Polson, Anthony E. Sisk, Dipti P. Sajed, William Speier, Corey W. Arnold
PathAL: An Active Learning Framework for Histopathology Image Analysis. IEEE Trans. Medical Imaging 41 (5) (2022)
Ekaterina Redekop, Karthik V. Sarma, Adam Kinnaird, Anthony Sisk, Steven S. Raman, Leonard S. Marks, William Speier, Corey W. Arnold
Attention-Guided Prostate Lesion Localization and Grade Group Classification with Multiple Instance Learning. MIDL (2022)
Pengxin Yu, Haoyue Zhang, Han Kang, Wen Tang, Corey W. Arnold, Rongguo Zhang
RPLHR-CT Dataset and Transformer Baseline for Volumetric Super-Resolution from CT Scans. CoRR (2022)
Pengxin Yu, Haoyue Zhang, Han Kang, Wen Tang, Corey W. Arnold, Rongguo Zhang
RPLHR-CT Dataset and Transformer Baseline for Volumetric Super-Resolution from CT Scans. MICCAI (6) (2022)
Wen Tang, Han Kang, Haoyue Zhang, Pengxin Yu, Corey W. Arnold, Rongguo Zhang
Transformer Lesion Tracker. MICCAI (6) (2022)
Abhejit Rajagopal, Ekaterina Redekop, Anil Kemisetti, Rushi Kulkarni, Steven S. Raman, Kirti Magudia, Corey W. Arnold, Peder E. Z. Larson
Federated Learning with Research Prototypes for Multi-Center MRI-based Detection of Prostate Cancer with Diverse Histopathology. CoRR (2022)
Wenyuan Li, Jiayun Li, Jennifer Polson, Zichen Wang, William Speier, Corey W. Arnold
High resolution histopathology image generation and segmentation through adversarial training. Medical Image Anal. 75 (2022)
Chao Chen, Zhihong Chen, Xinyu Jin, Lanjuan Li, William Speier, Corey W. Arnold
Attention-Guided Discriminative Region Localization and Label Distribution Learning for Bone Age Assessment. IEEE J. Biomed. Health Informatics 26 (3) (2022)
Justin Wood, Corey W. Arnold, Wei Wang
A Bayesian Topic Model for Human-Evaluated Interpretability. LREC (2022)
Jennifer Polson, Haoyue Zhang, Kambiz Nael, Noriko Salamon, Bryan Yoo, Namkug Kim, Dong-Wha Kang, William Speier, Corey W. Arnold
A Semi-Supervised Learning Framework to Leverage Proxy Information for Stroke MRI Analysis. EMBC (2021)
Nathan Siu, Maxime Ruiz, Sheyla Gonzalez Garrido, Yu Yan, Dylan Steinecke, Elizabeth Rao, Rachel Choi, Sarah Robertson, Sophie Deng, Corey W. Arnold, William Speier
Automatic Estimation of Limbal Stem Cell Densities in Cultured Epithelial Cell Microscopy Imaging. BIBE (2021)
Haoyue Zhang, Jennifer Polson, Kambiz Nael, Noriko Salamon, Bryan Yoo, William Speier, Corey W. Arnold
A Machine Learning Approach to Predict Acute Ischemic Stroke Thrombectomy Reperfusion using Discriminative MR Image Features. BHI (2021)
Justin Wood, Wei Wang, Corey W. Arnold
The Biased Coin Flip Process for Nonparametric Topic Modeling. ICDAR (2) (2021)
Haoyue Zhang, Jennifer S. Polson, Kambiz Nael, Noriko Salamon, Bryan Yoo, Suzie El-Saden, Fabien Scalzo, William Speier, Corey W. Arnold
Intra-domain task-adaptive transfer learning to determine acute ischemic stroke onset time. Comput. Medical Imaging Graph. 90 (2021)
Zichen Wang, Jiayun Li, Zhufeng Pan, Wenyuan Li, Anthony E. Sisk, Huihui Ye, William Speier, Corey W. Arnold
Hierarchical Graph Pathomic Network for Progression Free Survival Prediction. MICCAI (8) (2021)
Yiwen Meng, William Speier, Michael K. Ong, Corey W. Arnold
HCET: Hierarchical Clinical Embedding With Topic Modeling on Electronic Health Records for Predicting Future Depression. IEEE J. Biomed. Health Informatics 25 (4) (2021)
Chao Chen, Catalina Raymond, Bill Speier, Xinyu Jin, Timothy F. Cloughesy, Dieter R. Enzmann, Benjamin M. Ellingson, Corey W. Arnold
Synthesizing MR Image Contrast Enhancement Using 3D High-resolution ConvNets. CoRR (2021)
Yiwen Meng, William Speier, Michael K. Ong, Corey W. Arnold
Bidirectional Representation Learning From Transformers Using Multimodal Electronic Health Record Data to Predict Depression. IEEE J. Biomed. Health Informatics 25 (8) (2021)
Karthik V. Sarma, Stephanie A. Harmon, Thomas Sanford, Holger R. Roth, Ziyue Xu, Jesse Tetreault, Daguang Xu, Mona G. Flores, Alex G. Raman, Rushikesh Kulkarni, Bradford J. Wood, Peter L. Choyke, Alan Priester, Leonard S. Marks, Steven S. Raman, Dieter Enzmann, Baris Turkbey, William Speier, Corey W. Arnold
Federated learning improves site performance in multicenter deep learning without data sharing. J. Am. Medical Informatics Assoc. 28 (6) (2021)
Jiayun Li, Wenyuan Li, Anthony E. Sisk, Huihui Ye, W. Dean Wallace, William Speier, Corey W. Arnold
A multi-resolution model for histopathology image classification and localization with multiple instance learning. Comput. Biol. Medicine 131 (2021)
Yiwen Meng, William Speier, Michael K. Ong, Corey W. Arnold
Bidirectional Representation Learning from Transformers using Multimodal Electronic Health Record Data for Chronic to Predict Depression. CoRR (2020)
Haoyue Zhang, Jennifer S. Polson, Kambiz Nael, Noriko Salamon, Bryan Yoo, Suzie El-Saden, Fabien Scalzo, William Speier, Corey W. Arnold
Intra-Domain Task-Adaptive Transfer Learning to Determine Acute Ischemic Stroke Onset Time. CoRR (2020)
Yiwen Meng, William Speier, Chrisandra Shufelt, Sandy Joung, Jennifer E. Van Eyk, C. Noel Bairey Merz, Mayra Lopez, Brennan Spiegel, Corey W. Arnold
A Machine Learning Approach to Classifying Self-Reported Health Status in a Cohort of Patients With Heart Disease Using Activity Tracker Data. IEEE J. Biomed. Health Informatics 24 (3) (2020)
Jiayun Li, Wenyuan Li, Anthony E. Sisk, Huihui Ye, W. Dean Wallace, William Speier, Corey W. Arnold
A Multi-resolution Model for Histopathology Image Classification and Localization with Multiple Instance Learning. CoRR (2020)
Wenyuan Li, Zichen Wang, Yuguang Yue, Jiayun Li, William Speier, Mingyuan Zhou, Corey W. Arnold
Semi-supervised learning using adversarial training with good and bad samples. Mach. Vis. Appl. 31 (6) (2020)
Chao Chen, Zhihong Chen, Xinyu Jin, Lanjuan Li, William Speier, Corey W. Arnold
Attention-Guided Discriminative Region Localization for Bone Age Assessment. CoRR (2020)
Beibin Li, Ezgi Mercan, Sachin Mehta, Stevan Knezevich, Corey W. Arnold, Donald L. Weaver, Joann G. Elmore, Linda G. Shapiro
Classifying Breast Histopathology Images with a Ductal Instance-Oriented Pipeline. ICPR (2020)
Nithin Parthasarathy, Corey W. Arnold, Nader Pouratian, William Speier
Optimizing P300 speller performance using language models for character and word prediction. BIBE (2020)
Zichen Wang, Mu Zhou, Corey W. Arnold
Toward heterogeneous information fusion: bipartite graph convolutional networks for in silico drug repurposing. Bioinform. 36 (Supplement-1) (2020)
Beibin Li, Ezgi Mercan, Sachin Mehta, Stevan Knezevich, Corey W. Arnold, Donald L. Weaver, Joann G. Elmore, Linda G. Shapiro
Classifying Breast Histopathology Images with a Ductal Instance-Oriented Pipeline. CoRR (2020)
Wenyuan Li, Jiayun Li, Karthik V. Sarma, King Chung Ho, Shiwen Shen, Beatrice S. Knudsen, Arkadiusz Gertych, Corey W. Arnold
Path R-CNN for Prostate Cancer Diagnosis and Gleason Grading of Histological Images. IEEE Trans. Medical Imaging 38 (4) (2019)
King Chung Ho, William Speier, Haoyue Zhang, Fabien Scalzo, Suzie El-Saden, Corey W. Arnold
A Machine Learning Approach for Classifying Ischemic Stroke Onset Time From Imaging. IEEE Trans. Medical Imaging 38 (7) (2019)
Karthik V. Sarma, Brennan M. R. Spiegel, W. Mark Reid, Shawn Chen, Raina M. Merchant, Emily Seltzer, Corey W. Arnold
Estimating the Health-Related Quality of Life of Twitter Users Using Semantic Processing. MedInfo (2019)
Wenyuan Li, Zichen Wang, Jiayun Li, Jennifer Polson, William Speier, Corey W. Arnold
Semi-supervised learning based on generative adversarial network: a comparison between good GAN and bad GAN approach. CoRR (2019)
Wenyuan Li, Zichen Wang, Yuguang Yue, Jiayun Li, William Speier, Mingyuan Zhou, Corey W. Arnold
Semi-supervised Learning using Adversarial Training with Good and Bad Samples. CoRR (2019)
Yannan Yu, Bhargav Parsi, William Speier, Corey W. Arnold, Min Lou, Fabien Scalzo
LSTM Network for Prediction of Hemorrhagic Transformation in Acute Stroke. MICCAI (4) (2019)
William Speier, Corey W. Arnold, Nand Chandravadia, D. Roberts, Shrita Pendekanti, Andrew Marttini, Nader Pouratian
A Self-Paced P300 speller with Improved Typing Speed using continuous stimulus Presentations. GBCIC (2019)
Wenyuan Li, Zichen Wang, Jiayun Li, Jennifer Polson, William Speier, Corey W. Arnold
Semi-supervised learning based on generative adversarial network: a comparison between good GAN and bad GAN approach. CVPR Workshops (2019)
Jiayun Li, Wenyuan Li, Arkadiusz Gertych, Beatrice S. Knudsen, William Speier, Corey W. Arnold
An attention-based multi-resolution model for prostate whole slide imageclassification and localization. CoRR (2019)
Chrisandra Shufelt, Eldin Dzubur, Sandy Joung, Garth Fuller, Kelly N. Mouapi, Irene Van Den Broek, Mayra Lopez, Shivani Dhawan, Corey W. Arnold, William Speier, Mitra Mastali, Qin Fu, Jennifer E. Van Eyk, Brennan Spiegel, C. Noel Bairey Merz
A protocol integrating remote patient monitoring patient reported outcomes and cardiovascular biomarkers. npj Digit. Medicine 2 (2019)
Nathan Ing, Zhaoxuan Ma, Jiayun Li, Hootan Salemi, Corey W. Arnold, Beatrice S. Knudsen, Arkadiusz Gertych
Semantic segmentation for prostate cancer grading by convolutional neural networks. Medical Imaging: Digital Pathology (2018)
William Speier, Eldin Dzubur, Mary Zide, Chrisandra Shufelt, Sandy Joung, Jennifer E. Van Eyk, C. Noel Bairey Merz, Mayra Lopez, Brennan Spiegel, Corey W. Arnold
Evaluating utility and compliance in a patient-based eHealth study using continuous-time heart rate and activity trackers. J. Am. Medical Informatics Assoc. 25 (10) (2018)
Wenyuan Li, Yunlong Wang, Yong Cai, Corey W. Arnold, Emily Zhao, Yilian Yuan
Semi-supervised Rare Disease Detection Using Generative Adversarial Network. CoRR (2018)
Jiayun Li, William Speier, King Chung Ho, Karthik V. Sarma, Arkadiusz Gertych, Beatrice S. Knudsen, Corey W. Arnold
An EM-based semi-supervised deep learning approach for semantic segmentation of histopathological images from radical prostatectomies. Comput. Medical Imaging Graph. 69 (2018)
Yiwen Meng, William Speier, Eldin Dzubur, Brennan M. R. Spiegel, Corey W. Arnold
Predicting Patient Health Status using Activity Tracker Data. AMIA (2018)
Karthik V. Sarma, Brennan M. R. Spiegel, W. Mark Reid, Xiang S. Chen, Raina M. Merchant, Emily Seltzer, Corey W. Arnold
Estimating Health-related Quality of Life of Twitter Users: Methods for Semantic Processing of Social Media Posts. AMIA (2018)
King Chung Ho, William Speier, Suzie M. El-Saden, Corey W. Arnold
Classifying Acute Ischemic Stroke Onset Time using Deep Imaging Features. AMIA (2017)
Justin Wood, Patrick Tan, Wei Wang, Corey W. Arnold
Source-LDA: Enhancing Probabilistic Topic Models Using Prior Knowledge Sources. ICDE (2017)
Jiayun Li, Karthik V. Sarma, King Chung Ho, Arkadiusz Gertych, Beatrice S. Knudsen, Corey W. Arnold
A Multi-scale U-Net for Semantic Segmentation of Histological Images from Radical Prostatectomies. AMIA (2017)
William Hsu, Simon X. Han, Corey W. Arnold, Alex A. T. Bui, Dieter R. Enzmann
A data-driven approach for quality assessment of radiologic interpretations. J. Am. Medical Informatics Assoc. 23 (e1) (2016)
King Chung Ho, Fabien Scalzo, Karthik V. Sarma, Suzie El-Saden, Corey W. Arnold
A temporal deep learning approach for MR perfusion parameter estimation in stroke. ICPR (2016)
William Speier, Michael K. Ong, Corey W. Arnold
Using phrases and document metadata to improve topic modeling of clinical reports. J. Biomed. Informatics 61 (2016)
Corey W. Arnold, Andrea Oh, Shawn Chen, William Speier
Evaluating topic model interpretability from a primary care physician perspective. Comput. Methods Programs Biomed. 124 (2016)
Mary McNamara, Corey W. Arnold, Karthik Sarma, Denise R. Aberle, Edward B. Garon, Alex A. T. Bui
Patient portal preferences: Perspectives on imaging information. J. Assoc. Inf. Sci. Technol. 66 (8) (2015)
King Chung Ho, William Speier, Suzie El-Saden, David S. Liebeskind, Jeffrey L. Saver, Alex A. T. Bui, Corey W. Arnold
Predicting Discharge Mortality after Acute Ischemic Stroke Using Balanced Data. AMIA (2014)
Mary McNamara, Karthik Sarma, Denise R. Aberle, Alex A. T. Bui, Corey W. Arnold
Data Model for Personalized Patient Health Guidelines: An Exploratory Study. AMIA (2014)
Alex A. T. Bui, William Hsu, Corey W. Arnold, Suzie El-Saden, Denise R. Aberle, Ricky K. Taira
Perspective: Imaging-based observational databases for clinical problem solving: the role of informatics. J. Am. Medical Informatics Assoc. 20 (6) (2013)
Xiang Chen, Corey W. Arnold
Integrating UIMA Annotators in a Web-based Text Processing Framework. MedInfo (2013)
Corey W. Arnold, Tina Nguyen, Carla Janzen
BabySTEPS: A Sugar Tracking Electronic Portal System for Gestational Diabetes. MedInfo (2013)
Ricky K. Taira, Corey W. Arnold
Hierarchical Semantic Structures for Medical NLP. MedInfo (2013)
Corey W. Arnold, Mary McNamara, Suzie El-Saden, Shawn Chen, Ricky K. Taira, Alex A. T. Bui
Research and applications: Imaging informatics for consumer health: towards a radiology patient portal. J. Am. Medical Informatics Assoc. 20 (6) (2013)
Alexa Love, Corey W. Arnold, Suzie El-Saden, David S. Liebeskind, Lewellyn P. Andrada, Jeffrey L. Saver, Alex A. T. Bui
Unifying Acute Stroke Treatment Guidelines for a Bayesian Belief Network. MedInfo (2013)
Corey W. Arnold, William Speier
A topic model of clinical reports. SIGIR (2012)
William Speier, Juan Eugenio Iglesias, Leila El-Kara, Zhuowen Tu, Corey W. Arnold
Robust Skull Stripping of Clinical Glioblastoma Multiforme Data. MICCAI (3) (2011)
William Hsu, Corey W. Arnold, Ricky K. Taira
A neuro-oncology workstation for structuring, modeling, and visualizing patient records. IHI (2010)