Chun-Yuan Lin

Publication Activity (10 Years)

Years Active: 1998-2024
Publications (10 Years): 19

Top Topics

Multiple Sequence Alignment

Graphics Processing Units

Packet Filtering

Top Venues

Int. J. Comput. Sci. Eng.

Concurr. Comput. Pract. Exp.

CIT/IUCC/DASC/PICom

Publications

Mosiur Rahaman, Chun-Yuan Lin, Princy Pappachan, Brij B. Gupta, Ching-Hsien Hsu
Privacy-Centric AI and IoT Solutions for Smart Rural Farm Monitoring and Control. Sensors 24 (13) (2024)
Mosiur Rahaman, Chun-Yuan Lin, Massoud Moslehpour
SAPD: Secure Authentication Protocol Development for Smart Healthcare Management Using IoT. GCCE (2023)
Hui-Jun Cheng, Sheng-Fu Zeng, Chun-Yuan Lin
Platform Construction to Protect Portraits of Others. CCCI (2023)
Chun-Yuan Lin, Mosiur Rahaman, Massoud Moslehpour, Sourasis Chattopadhyay, Varsha Arya
Web Semantic-Based MOOP Algorithm for Facilitating Allocation Problems in the Supply Chain Domain. Int. J. Semantic Web Inf. Syst. 19 (1) (2023)
Che-Lun Hung, Chun-Yuan Lin
GPU-Based Texture Analysis approach for Mammograms Institute of Biomedical Informatics. BIBM (2020)
Hui-Jun Cheng, Jyh-Da Wei, Chun-Yuan Lin, Jin Ye
Detecting Seam-Carved Image by Extreme Learning Machines Using Patch Analysis Method, Jury Voting, and Combinatorial Fusion. IEEE Trans. Syst. Man Cybern. Syst. 50 (5) (2020)
Yu-Shiang Lin, Chun-Yuan Lin, Che-Rung Lee, Yeh-Ching Chung
qCUDA: GPGPU Virtualization for High Bandwidth Efficiency. CloudCom (2019)
Ming-Yan Guo, Hui-Jun Cheng, Chun-Yuan Lin, Yen-Jen Lin, Ann-Shyn Chiang
Computing Image Intersection and Union Regions for Drosophila Neurons Based on Multi-core CPUs. I-SPAN (2019)
Hui-Jun Cheng, Chun-Yuan Lin, Chun-Chien Mao
Accelerated Parallel Based Distance Calculations for Live-Cell Time-Lapse Images. ICS (2018)
Hui-Jun Cheng, Chun-Yuan Lin, Cheng-Xian Wu, Che-Lun Hung, Wei-Hsiang Chen, Chuan Yi Tang
Using Deep Learning to Identify Cell and Particle in Live-Cell Time-lapse Images. BIBM (2018)
Che-Lun Hung, Tzu-Hung Hsu, Hsiao-Hsi Wang, Chun-Yuan Lin
A GPU-based Bit-Parallel Multiple Pattern Matching Algorithm. HPCC/SmartCity/DSS (2018)
Ren-You Yan, Che-Lun Hung, Chun-Yuan Lin, Hsiao-Hsi Wang
Improvement of Accuracy of Well-Known Convoluational Neural Networks by Efficient Hybrid Strategy. I-SPAN (2018)
Che-Lun Hung, Chun-Yuan Lin, Po-Chang Wu
An Efficient GPU-Based Multiple Pattern Matching Algorithm for Packet Filtering. J. Signal Process. Syst. 86 (2-3) (2017)
Chun-Yuan Lin, Huang Ting Yen, Che-Lun Hung
Compressing three-dimensional sparse arrays using inter- and intra-task parallelization strategies on Intel Xeon and Xeon Phi. J. Supercomput. 73 (8) (2017)
Che-Lun Hung, Frédéric Magoulès, Meikang Qiu, Robert C. Hsu, Chun-Yuan Lin
Embedded multi-core computing and applications. J. Supercomput. 73 (8) (2017)
Che-Lun Hung, Chun-Yuan Lin, Chia Shin Ou, Yuan-Hong Tseng, Po-Yen Hung, Shipeng Li, Chun Ting Fu
Efficient bit-parallel subcircuit extraction using CUDA. Concurr. Comput. Pract. Exp. 28 (16) (2016)
Che-Lun Hung, Chun-Yuan Lin, Fu-Che Wu, Yu-Wei Chan
Efficient parallel UPGMA algorithm based on multiple GPUs. BIBM (2016)
Che-Lun Hung, Chun-Yuan Lin
Efficient parallelised search engine based on virtual cluster. Int. J. Comput. Sci. Eng. 12 (1) (2016)
Kuan-Yu Yeh, Hui-Jun Cheng, Jin Ye, Jyh-Da Wei, Chun-Yuan Lin
Constructing a GPU cluster platform based on multiple NVIDIA Jetson TK1. BIBM (2016)
Yu Liu, Yang Hong, Chung-Hung Wang, Sheng-Ta Lee, Chun-Yuan Lin, Che-Lun Hung
Innovative approach for porting existing CPU program to its CUDA program. BIBM (2015)
Che-Lun Hung, Yu-Shiang Lin, Chun-Yuan Lin, Yeh-Ching Chung, Yi-Fang Chung
CUDA ClustalW: An efficient parallel algorithm for progressive multiple sequence alignment on Multi-GPUs. Comput. Biol. Chem. 58 (2015)
Chun-Yuan Lin, Huang Ting Yen, Che-Lun Hung
Efficient Strategies of Compressing Three-Dimensional Sparse Arrays Based on Intel XEON and Intel XEON Phi Environments. CIT/IUCC/DASC/PICom (2015)
Chun-Yuan Lin, Jin Ye, Che-Lun Hung, Chung-Hung Wang, Min Su, Jianjun Tan
Constructing a Bioinformatics Platform with Web and Mobile Services Based on NVIDIA Jetson TK1. Int. J. Grid High Perform. Comput. 7 (4) (2015)
Che-Lun Hung, Po-Chang Wu, Hsiao-Hsi Wang, Chun-Yuan Lin
Efficient Parallel Muti-pattern Matching Using GPGPU Acceleration for Packet Filtering. HPCC/CSS/ICESS (2015)
Yu-Shiang Lin, Chun-Yuan Lin, Che-Lun Hung, Yeh-Ching Chung, Kual-Zheng Lee
GPU-UPGMA: high-performance computing for UPGMA algorithm based on graphics processing units. Concurr. Comput. Pract. Exp. 27 (13) (2015)
Che-Lun Hung, Chun-Yuan Lin, Yuan-Huai Wu, Hsiao-Hsi Wang, Yu-Chen Hu
Efficient Brain MRI Segmentation Algorithm on TK1. CIT/IUCC/DASC/PICom (2015)
Zhi-ting Yu, Quan Qian, Chun-Yuan Lin, Che-Lun Hung
High Performance Datafly based Anonymity Algorithm and Its L-Diversity. Int. J. Grid High Perform. Comput. 7 (3) (2015)
Min Su, Jianjun Tan, Chun-Yuan Lin, Jin Ye, Chung-Hung Wang, Che-Lun Hung
Constructing a Mobility and Acceleration Computing Platform with NVIDIA Jetson TK1. HPCC/CSS/ICESS (2015)
Chun-Yuan Lin, Yu-Shiang Lin
Efficient parallel algorithm for multiple sequence alignments with regular expression constraints on graphics processing units. Int. J. Comput. Sci. Eng. 9 (1/2) (2014)
Che-Lun Hung, Chun-Yuan Lin, Hsiao-Hsi Wang
An efficient parallel-network packet pattern-matching approach using GPUs. J. Syst. Archit. 60 (5) (2014)
Chun-Yuan Lin, Hsiao-Chieh Chi, Kuei-Chung Shih, Jiayi Zhou, Naiwan Hsiao, Chuan Yi Tang
Development of 3D-QSAR combination approach for discovering and analysing neuraminidase inhibitors in silico. Int. J. Data Min. Bioinform. 9 (3) (2014)
Chun-Yuan Lin, Sheng-Ta Li, Che-Lun Hung
Frequency-based re-sequencing tool for short reads on graphics processing units. Int. J. Comput. Sci. Eng. 9 (1/2) (2014)
Chun-Yuan Lin, Chung-Hung Wang, Che-Lun Hung, Yu-Shiang Lin
Efficient parallel algorithm for compound comparisons on multi-GPUs. BIBM (2014)
Che-Lun Hung, Hsiao-Hsi Wang, Jieh-Shan Yeh, Yu-Chen Hu, Chun-Yuan Lin, Yaw-Ling Lin
Preference Utility algorithm using GPGPU architecture. ICIS (2013)
Chun-Yuan Lin, Che-Lun Hung, Jen-Cheng Huang
Efficient GPU-Based Algorithm for Aligning Huge Sequence Database. HPCC/EUC (2013)
Yu-Shiang Lin, Chun-Yuan Lin, Hsiao-Chieh Chi, Yeh-Ching Chung
Multiple Sequence Alignments with Regular Expression Constraints on a Cloud Service System. Int. J. Grid High Perform. Comput. 5 (3) (2013)
Che-Lun Hung, Chun-Yuan Lin, Hsiao-Hsi Wang, Chin-Yuan Chang
Efficient Packet Pattern Matching for Gigabit Network Intrusion Detection Using GPUs. HPCC-ICESS (2012)
Che-Lun Hung, Chun-Yuan Lin
Cloud service of analyzing virus data: A case study for Norovirus. CloudCom (2012)
Kuei-Chung Shih, Chun-Yuan Lin, Hsiao-Chieh Chi, Chrong-Shiong Hwang, Ting-Shou Chen, Chuan Yi Tang, Naiwan Hsiao
. J. Chem. Inf. Model. 52 (1) (2012)
Chun-Yuan Lin, Wei Sheng Lee, Chuan Yi Tang
Parallel Shellsort Algorithm for Many-Core GPUs with CUDA. Int. J. Grid High Perform. Comput. 4 (2) (2012)
Sheng-Ta Lee, Chun-Yuan Lin, Che-Lun Hung, Hsuan Ying Huang
Using frequency distance filteration for reducing database search workload on GPU-based cloud service. CloudCom (2012)
Yu-Rong Chen, Che-Lun Hung, Yu-Shiang Lin, Chun-Yuan Lin, Tien-Lin Lee, Kual-Zheng Lee
Parallel UPGMA Algorithm on Graphics Processing Units Using CUDA. HPCC-ICESS (2012)
Yu-Shiang Lin, Chun-Yuan Lin, Yeh-Ching Chung
GPU-based cloud service for multiple sequence alignments with regular expression constrains. CloudCom (2012)
Che-Lun Hung, Chun-Yuan Lin, Yu-Chen Hu
UNION: An Efficient Mapping Tool Using UniMark with Non-overlapping Interval Indexing Strategy. FGIT-DTA/BSBT (2011)
Kuei-Chung Shih, Chun-Yuan Lin, Jiayi Zhou, Hsiao-Chieh Chi, Ting-Shou Chen, Chun-Chung Wang, Hsiang-Wen Tseng, Chuan Yi Tang
Development of Novel 3D-QSAR Combination Approach for Screening and Optimizing B-Raf Inhibitors in silico. J. Chem. Inf. Model. 51 (2) (2011)
Chun-Yuan Lin, Chuan Yi Tang, Sheng-Ta Li, Yaw-Ling Lin, Che-Lun Hung
CUDA-FRESCO: Frequency-Based RE-Sequencing Tool Based on CO-clustering Segmentation by GPU. HPCC (2011)
Che-Lun Hung, Chun-Yuan Lin, Shih-Cheng Chang, Yeh-Ching Chung, Shu Ju Hsieh, Chuan Yi Tang, Yaw-Ling Lin
Multiple genome sequences alignment algorithm based on coding regions. Int. J. Comput. Biol. Drug Des. 4 (2) (2011)
Kuei-Chung Shih, Chun-Yuan Lin, Jiayi Zhou, Shih-Han Huang, Chuan Yi Tang
Develop integration modeling approach for discovery neuraminidase inhibitors in silico based on pharmacophore and CoMSIA models. BIBM Workshops (2010)
Che-Lun Hung, Chun-Yuan Lin, Shih-Cheng Chang, Yeh-Ching Chung, Shu Ju Hsieh, Chuan Yi Tang, Yaw-Ling Lin
CORAL-M: Heuristic coding region alignment method for multiple genome sequences. BIBM Workshops (2010)
Jiayi Zhou, Kun-Ming Yu, Chun-Yuan Lin, Kuei-Chung Shih, Chuan Yi Tang
Balanced Multi-process Parallel Algorithm for Chemical Compound Inference with Given Path Frequencies. ICA3PP (2) (2010)
Chen Hua Lu, Chun-Yuan Lin, Chuan Yi Tang
A re-sequencing tool for high mismatch-tolerant short read alignment based on Burrows-Wheeler Transform. BIBM Workshops (2010)
Che-Lun Hung, Chun-Yuan Lin, Yeh-Ching Chung, Chuan Yi Tang
A Parallel Algorithm for Three-Profile Alignment Method. IJCBS (2009)
Kun-Ming Yu, Yi-Yan Chang, Jiayi Zhou, Chun-Yuan Huang, Whei-meih Chang, Chun-Yuan Lin, Chuan Yi Tang
Chemical Compounds with Path Frequency Using Multi-Core Technology. Infoscale (2009)
Kun-Ming Yu, Jiayi Zhou, Chun-Yuan Lin, Chuan Yi Tang
Efficient parallel branch-and-bound algorithm for constructing minimum ultrametric trees. J. Parallel Distributed Comput. 69 (11) (2009)
Kun-Ming Yu, Chun-Yuan Lin, Hui-Yuan Wang, Chuan Yi Tang, Jiayi Zhou
Parallel branch-and-bound approach with MPI technology in inferring chemical compounds with path frequency. GrC (2009)
Ying Chih Lin, Chun-Yuan Lin, Chunhung Richard Lin
Sorting by reversals and block-interchanges with various weight assignments. BMC Bioinform. 10 (2009)
Che-Lun Hung, Chun-Yuan Lin, Yeh-Ching Chung, Chuan Yi Tang
Introducing Variable Gap Penalties into Three-Sequence Alignment for Protein Sequences. AINA Workshops (2008)
Chun-Yuan Lin, Yeh-Ching Chung
Efficient Data Distribution Scheme for Multi-Dimensional Sparse Arrays. J. Inf. Sci. Eng. 23 (1) (2007)
Chun-Yuan Lin, Yeh-Ching Chung
Data distribution schemes of sparse arrays on distributed memory multicomputers. J. Supercomput. 41 (1) (2007)
Chun-Yuan Lin, Chen Tai Huang, Yeh-Ching Chung, Chuan Yi Tang
Efficient Parallel Algorithm for Optimal Three-Sequences Alignment. ICPP (2007)
Kun-Ming Yu, Jiayi Zhou, Chun-Yuan Lin, Chuan Yi Tang
3-Points Relationship Based Parallel Algorithm for Minimum Ultrametric Tree Construction. PaCT (2007)
Shu Ju Hsieh, Chun-Yuan Lin, Ning Han Liu, Chuan Yi Tang
Comparative Gene Prediction Based on Gene Structure Conservation. PRIB (2006)
Shu Ju Hsieh, Chun-Yuan Lin, Ning Han Liu, Wei Yuan Chow, Chuan Yi Tang
GeneAlign: a coding exon prediction tool based on phylogenetical comparisons. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)
Kun-Ming Yu, Jiayi Zhou, Chun-Yuan Lin, Chuan Yi Tang
An Efficient Parallel Algorithm for Ultrametric Tree Construction Based on 3PR. ISPA Workshops (2006)
Chia-Jen Hsu, Chien Chen, Chun-Yuan Lin
Fast packet classification using bit compression. GLOBECOM (2005)
Kun-Ming Yu, Yu-Weir Chang, YaoHua Yang, Jiayi Zhou, Chun-Yuan Lin, Chuan Yi Tang
A Fast Technique for Constructing Evolutionary Tree with the Application of Compact Sets. PaCT (2005)
Shu Ju Hsieh, Yun Sheng Chung, Chun-Yuan Lin, Chuan Yi Tang
EXONSCAN: EXON prediction with Signal detection and Coding region AligNment in homologous sequences. SAC (2005)
Chun-Yuan Lin, Ken-Li Lin, Chuen-Der Huang, Hsiu-Ming Chang, Chiao Yun Yang, Chin-Teng Lin, Chuan Yi Tang, D. Frank Hsu
Feature Selection and Combination Criteria for Improving Predictive Accuracy in Protein Structure Classification. BIBE (2005)
Chun-Yuan Lin, Yeh-Ching Chung, Jen-Shiuh Liu
-Based Sparse Arrays on Distributed Memory Multicomputers. J. Supercomput. 34 (3) (2005)
Shu Ju Hsieh, Yun Sheng Chung, Chuan Yi Tang, Chun-Yuan Lin
Comparative Exon Prediction based on Heuristic Coding Region Alignment. ISPAN (2005)
Chun-Yuan Lin, Yeh-Ching Chung, Jen-Shiuh Liu
Performance Evaluation of Data Distributions with Load-Balancing for Sparse Arrays. ISPAN (2004)
Chun-Yuan Lin, Yeh-Ching Chung, Jen-Shiuh Liu
Efficient Data Parallel Algorithms for Multidimensional Array Operations Based on the EKMR Scheme for Distributed Memory Multicomputers. IEEE Trans. Parallel Distributed Syst. 14 (7) (2003)
Chun-Yuan Lin, Yeh-Ching Chung, Jen-Shiuh Liu
Efficient Data Compression Methods for Multidimensional Sparse Array Operations Based on the EKMR Scheme. IEEE Trans. Computers 52 (12) (2003)
Chun-Yuan Lin, Yeh-Ching Chung, Jen-Shiuh Liu
Data Distribution Schemes of Sparse Arrays on Distributed Memory Multicomputers. ICPP Workshops (2002)
Chun-Yuan Lin, Jen-Shiuh Liu, Yeh-Ching Chung
Efficient Representation Scheme for Multidimensional Array Operations. IEEE Trans. Computers 51 (3) (2002)
Chun-Yuan Lin, Yeh-Ching Chung, Jen-Shiuh Liu
Efficient Data Compression Methods for Multi-Dimensional Sparse Array Operations. CW (2002)
Ting-Yi Sung, Chun-Yuan Lin, Yen-Chu Chuang, Lih-Hsing Hsu
Fault Tolerant Token Ring Embedding in Double Loop Networks. Inf. Process. Lett. 66 (4) (1998)