EXONSCAN: EXON prediction with Signal detection and Coding region AligNment in homologous sequences.
Shu Ju HsiehYun Sheng ChungChun-Yuan LinChuan Yi TangPublished in: SAC (2005)
Keyphrases
- signal detection
- sequence alignment
- physico chemical
- comparative analysis
- dna sequences
- predictive coding
- multiple sequence alignment
- gene prediction
- multiple sequence alignments
- rna sequences
- linear prediction
- coding regions
- protein sequences
- prediction accuracy
- pairwise
- hidden markov models
- weak signal
- coding scheme
- compression efficiency
- coding method
- prediction algorithm
- prediction scheme
- multiple alignment
- prediction model
- protein structure prediction
- region of interest
- dynamic time warping
- global alignment
- prediction error
- image regions
- sequential patterns
- phylogenetic trees
- variable length
- computational biology
- scalable video coding