Chad L. Myers

Publication Activity (10 Years)

Years Active: 2004-2021
Publications (10 Years): 3

Top Topics

Exploratory Data Analysis

Structural Similarity

Image Quality Measures

Top Venues

PLoS Comput. Biol.

J. Chem. Inf. Model.

Publications

Hamid Safizadeh, Scott W. Simpkins, Justin Nelson, Sheena C. Li, Jeff S. Piotrowski, Mami Yoshimura, Yoko Yashiroda, Hiroyuki Hirano, Hiroyuki Osada, Minoru Yoshida, Charles Boone, Chad L. Myers
Improving Measures of Chemical Structural Similarity Using Machine Learning on Chemical-Genetic Interactions. J. Chem. Inf. Model. 61 (9) (2021)
Justin Nelson, Scott W. Simpkins, Hamid Safizadeh, Sheena C. Li, Jeff S. Piotrowski, Hiroyuki Hirano, Yoko Yashiroda, Hiroyuki Osada, Minoru Yoshida, Charles Boone, Chad L. Myers
MOSAIC: a chemical-genetic interaction data repository and web resource for exploring chemical modes of action. Bioinform. 34 (7) (2018)
Scott W. Simpkins, Justin Nelson, Raamesh Deshpande, Sheena C. Li, Jeff S. Piotrowski, Erin H. Wilson, Abraham A. Gebre, Hamid Safizadeh, Reika Okamoto, Mami Yoshimura, Michael Costanzo, Yoko Yashiroda, Yoshikazu Ohya, Hiroyuki Osada, Minoru Yoshida, Charles Boone, Chad L. Myers
Predicting bioprocess targets of chemical compounds through integration of chemical-genetic and genetic interactions. PLoS Comput. Biol. 14 (10) (2018)
Chandrima Sarkar, Raamesh Deshpande, Chad L. Myers
Analysis of Barcode sequence features to find anomalies due to amplification Bias. CoRR (2014)
Omar Wagih, Matej Usaj, Anastasia Baryshnikova, Benjamin VanderSluis, Elena Kuzmin, Michael Costanzo, Chad L. Myers, Brenda J. Andrews, Charles Boone, Leopold Parts
SGAtools: one-stop analysis and visualization of array-based genetic interaction screens. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Recep Colak, TaeHyung Kim, Magali Michaut, Mark G. F. Sun, Manuel Irimia, Jeremy Bellay, Chad L. Myers, Benjamin J. Blencowe, Philip M. Kim
Distinct Types of Disorder in the Human Proteome: Functional Implications for Alternative Splicing. PLoS Comput. Biol. 9 (4) (2013)
Magali Michaut, Anastasia Baryshnikova, Michael Costanzo, Chad L. Myers, Brenda J. Andrews, Charles Boone, Gary D. Bader
Protein Complexes are Central in the Yeast Genetic Landscape. PLoS Comput. Biol. 7 (2) (2011)
Gaurav Pandey, Bin Zhang, Aaron N. Chang, Chad L. Myers, Jun Zhu, Vipin Kumar, Eric E. Schadt
An Integrative Multi-Network and Multi-Classifier Approach to Predict Genetic Interactions. PLoS Comput. Biol. 6 (9) (2010)
Raamesh Deshpande, Shikha Sharma, Catherine M. Verfaillie, Wei-Shou Hu, Chad L. Myers
A Scalable Approach for Discovering Conserved Active Subnetworks across Species. PLoS Comput. Biol. 6 (12) (2010)
Judice L. Y. Koh, Huiming Ding, Michael Costanzo, Anastasia Baryshnikova, Kiana Toufighi, Gary D. Bader, Chad L. Myers, Brenda J. Andrews, Charles Boone
DRYGIN: a database of quantitative genetic interaction networks in yeast. Nucleic Acids Res. 38 (Database-Issue) (2010)
Gang Fang, Rui Kuang, Gaurav Pandey, Michael S. Steinbach, Chad L. Myers, Vipin Kumar
Subspace Differential Coexpression Analysis: Problem Definition and a General Approach. Pacific Symposium on Biocomputing (2010)
Matthew A. Hibbs, Chad L. Myers, Curtis Huttenhower, David C. Hess, Kai Li, Amy A. Caudy, Olga G. Troyanskaya
Directing Experimental Biology: A Case Study in Mitochondrial Biogenesis. PLoS Comput. Biol. 5 (3) (2009)
Curtis Huttenhower, Matthew A. Hibbs, Chad L. Myers, Amy A. Caudy, David C. Hess, Olga G. Troyanskaya
The impact of incomplete knowledge on evaluation: an experimental benchmark for protein function prediction. Bioinform. 25 (18) (2009)
Gaurav Pandey, Chad L. Myers, Vipin Kumar
Incorporating functional inter-relationships into protein function prediction algorithms. BMC Bioinform. 10 (2009)
Gaurav Pandey, Gowtham Atluri, Michael S. Steinbach, Chad L. Myers, Vipin Kumar
An association analysis approach to biclustering. KDD (2009)
Jeremy Bellay, Benjamin VanderSluis, Yungil Kim, Sunayan Bandyopadhyay, Chad L. Myers
Characterization of systems-level organization through mining large-scale genetic interaction networks. GENSiPS (2009)
Yuanfang Guan, Chad L. Myers, Rong Lu, Ihor Lemischka, Carol J. Bult, Olga G. Troyanskaya
A Genomewide Functional Network for the Laboratory Mouse. PLoS Comput. Biol. 4 (9) (2008)
Matthew A. Hibbs, David C. Hess, Chad L. Myers, Curtis Huttenhower, Kai Li, Olga G. Troyanskaya
Exploring the functional landscape of gene expression: directed search of large microarray compendia. Bioinform. 23 (20) (2007)
Curtis Huttenhower, Avi I. Flamholz, Jessica N. Landis, Sauhard Sahi, Chad L. Myers, Kellen L. Olszewski, Matthew A. Hibbs, Nathan O. Siemers, Olga G. Troyanskaya, Hilary A. Coller
Nearest Neighbor Networks: clustering expression data based on gene neighborhoods. BMC Bioinform. 8 (2007)
Chad L. Myers, Olga G. Troyanskaya
Context-sensitive data integration and prediction of biological networks. Bioinform. 23 (17) (2007)
Curtis Huttenhower, Matthew A. Hibbs, Chad L. Myers, Olga G. Troyanskaya
A scalable method for integration and functional analysis of multiple microarray datasets. Bioinform. 22 (23) (2006)
Rachel S. G. Sealfon, Matthew A. Hibbs, Curtis Huttenhower, Chad L. Myers, Olga G. Troyanskaya
GOLEM: an interactive graph-based gene-ontology navigation and analysis tool. BMC Bioinform. 7 (2006)
Chad L. Myers, Xing Chen, Olga G. Troyanskaya
Visualization-based discovery and analysis of genomic aberrations in microarray data. BMC Bioinform. 6 (2005)
Sun-Yuan Kung, Chad L. Myers, Xinying Zhang
A recursive QR approach to adaptive equalization of time-varying MIMO channels. Commun. Inf. Syst. 5 (2) (2005)
Sun-Yuan Kung, Chad L. Myers, Xinying Zhang
A recursive QR approach to semi-blind equalization of time-varying MIMO channels. ICASSP (4) (2004)
Chad L. Myers, Maitreya J. Dunham, Sun-Yuan Kung, Olga G. Troyanskaya
Accurate detection of aneuploidies in array CGH and gene expression microarray data. Bioinform. 20 (18) (2004)
Xinying Zhang, Chad L. Myers, Sun-Yuan Kung
Cross-weighted Fisher discriminant analysis for visualization of DNA microarray data. ICASSP (5) (2004)