Anthony N. Nguyen

Publication Activity (10 Years)

Years Active: 2001-2024
Publications (10 Years): 31

Top Topics

Active Learning

Medical Records

Prognostic Factors

Discharge Summaries

Top Venues

J. Biomed. Informatics

Publications

Jinghui Liu, Aaron Nicolson, Jason Dowling, Bevan Koopman, Anthony N. Nguyen
e-Health CSIRO at "Discharge Me!" 2024: Generating Discharge Summary Sections with Fine-tuned Language Models. CoRR (2024)
Filip Rusak, Bevan Koopman, Nathan J. Brown, Kevin Chu, Jinghui Liu, Anthony N. Nguyen
Catching Misdiagnosed Limb Fractures in the Emergency Department Using Cross-institution Transfer Learning. ALTA (2023)
Jinghui Liu, Daniel Capurro, Anthony N. Nguyen, Karin Verspoor
Attention-based multimodal fusion with contrast for robust clinical prediction in the face of missing modalities. J. Biomed. Informatics 145 (2023)
Yutong Wu, James A. Hughes, Anna-Lisa Lyrstedt, Sarah Hazelwood, Nathan J. Brown, Lee Jones, Clint Douglas, Rajeev Jarugula, Kevin Chu, Anthony N. Nguyen
Developing Robust Clinical Text Deep Learning Models - A "Painless" Approach. MedInfo (2023)
Jinghui Liu, Daniel Capurro, Anthony N. Nguyen, Karin Verspoor
Improving Text-based Early Prediction by Distillation from Privileged Time-Series Text. CoRR (2023)
Leibo Liu, Óscar Pérez Concha, Anthony N. Nguyen, Vicki Bennett, Louisa Jorm
Automated ICD coding using extreme multi-label long text transformer-based models. Artif. Intell. Medicine 144 (2023)
Leibo Liu, Óscar Pérez Concha, Anthony N. Nguyen, Vicki Bennett, Louisa Jorm
Hierarchical label-wise attention transformer model for explainable ICD coding. J. Biomed. Informatics 133 (2022)
Jinghui Liu, Daniel Capurro, Anthony N. Nguyen, Karin Verspoor
"Note Bloat" impacts deep learning-based NLP models for clinical prediction tasks. J. Biomed. Informatics 133 (2022)
Leibo Liu, Óscar Pérez Concha, Anthony N. Nguyen, Vicki Bennett, Louisa Jorm
De-identifying Australian hospital discharge summaries: An end-to-end framework using ensemble of deep learning models. J. Biomed. Informatics 135 (2022)
Jinghui Liu, Daniel Capurro, Anthony N. Nguyen, Karin Verspoor
Early prediction of diagnostic-related groups and estimation of hospital cost by processing clinical notes. npj Digit. Medicine 4 (2021)
Hamed Hassanzadeh, Sarvnaz Karimi, Anthony N. Nguyen
Matching patients to clinical trials using semantically enriched document representation. J. Biomed. Informatics 105 (2020)
Anthony N. Nguyen, Hamed Hassanzadeh, Yushi Zhang, John O'Dwyer, David Conlan, Michael Lawley, Jim Steel, Kylynn Loi, Peter Rizzo
A Decision Support System for Pathology Test Result Reviews in an Emergency Department to Support Patient Safety and Increase Efficiency. MedInfo (2019)
Richard Khor, Anthony N. Nguyen, John O'Dwyer, Gargi Kothari, Joseph Sia, David Chang, Sweet Ping Ng, Gillian Duchesne, Farshad Foroudi
Extracting tumour prognostic factors from a diverse electronic record dataset in genito-urinary oncology. Int. J. Medical Informatics 121 (2019)
Hamed Hassanzadeh, Anthony N. Nguyen, Karin Verspoor
Quantifying semantic similarity of clinical evidence in the biomedical literature to facilitate related evidence synthesis. J. Biomed. Informatics 100 (2019)
Hamed Hassanzadeh, Mahnoosh Kholghi, Anthony N. Nguyen, Kevin Chu
Clinical Document Classification Using Labeled and Unlabeled Data Across Hospitals. CoRR (2018)
Thanat Chokwijitkul, Anthony N. Nguyen, Hamed Hassanzadeh, Siegfried Perez
Identifying Risk Factors For Heart Disease in Electronic Medical Records: A Deep Learning Approach. BioNLP (2018)
Bevan Koopman, Anthony N. Nguyen, Danica Cossio, Mary-Jane Courage, Gary Francois
Extracting Cancer Mortality Statistics from Free-text Death Certificates: A View from the Trenches. ADCS (2018)
Duy-Hoa Ngo, Alejandro Metke-Jimenez, Anthony N. Nguyen
Knowledge-based Feature Engineering for Detecting Medication and Adverse Drug Events from Electronic Health Records. Medication and Adverse Drug Event Detection (2018)
Bevan Koopman, Guido Zuccon, Anthony N. Nguyen, Anton Bergheim, Narelle Grayson
Extracting cancer mortality statistics from death certificates: A hybrid machine learning and rule-based approach for common and rare cancers. Artif. Intell. Medicine 89 (2018)
Hamed Hassanzadeh, Anthony N. Nguyen, Sarvnaz Karimi, Kevin Chu
Transferability of artificial neural networks for clinical document classification across hospitals: A case study on abnormality detection from radiology reports. J. Biomed. Informatics 85 (2018)
Anthony N. Nguyen, Donna L. Truran, Madonna Kemp, Bevan Koopman, David Conlan, John O'Dwyer, Ming Zhang, Sarvnaz Karimi, Hamed Hassanzadeh, Michael Lawley, Damian J. Green
Computer-Assisted Diagnostic Coding: Effectiveness of an NLP-based approach using SNOMED CT to ICD-10 mappings. AMIA (2018)
Son N. Tran, Qing Zhang, Anthony N. Nguyen, Xuan-Son Vu, Ngo Tung Son
Improving Recurrent Neural Networks with Predictive Propagation for Sequence Labelling. ICONIP (1) (2018)
Hamed Hassanzadeh, Mahnoosh Kholghi, Anthony N. Nguyen, Kevin Chu
Clinical Document Classification Using Labeled and Unlabeled Data Across Hospitals. AMIA (2018)
Sarvnaz Karimi, Xiang Dai, Hamed Hassanzadeh, Anthony N. Nguyen
Automatic Diagnosis Coding of Radiology Reports: A Comparison of Deep Learning and Conventional Classification Methods. BioNLP (2017)
Mahnoosh Kholghi, Lance De Vine, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen
Clinical information extraction using small data: An active learning approach based on sequence representations and word embeddings. J. Assoc. Inf. Sci. Technol. 68 (11) (2017)
Mahnoosh Kholghi, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen
Active learning reduces annotation time for clinical concept extraction. Int. J. Medical Informatics 106 (2017)
Anthony N. Nguyen, Julie Moore, John O'Dwyer, Shoni Philpot
Automated Cancer Registry Notifications: Validation of a Medical Text Analytics System for Identifying Patients with Cancer from a State-Wide Pathology Repository. AMIA (2016)
Mahnoosh Kholghi, Lance De Vine, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen
The benefits of word embeddings features for active learning in clinical information extraction. CoRR (2016)
Mahnoosh Kholghi, Lance De Vine, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen
The Benefits of Word Embeddings Features for Active Learning in Clinical Information Extraction. ALTA (2016)
Mahnoosh Kholghi, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen
Active learning: a step towards automating medical concept extraction. J. Am. Medical Informatics Assoc. 23 (2) (2016)
Hamed Hassanzadeh, Anthony N. Nguyen, Bevan Koopman
Evaluation of Medical Concept Annotation Systems on Clinical Records. ALTA (2016)
Hamed Tayebikhorami, Alejandro Metke-Jimenez, Anthony N. Nguyen, Guido Zuccon
Oyster: A Tool for Fine-Grained Ontological Annotations in Free-Text. AIRS (2015)
Anthony N. Nguyen, Jane Hunter, Hamed Hassanzadeh, Diego Mollá, Tudor Groza
Similarity Metrics for Clustering PubMed Abstracts for Evidence Based Medicine. ALTA (2015)
Lance De Vine, Mahnoosh Kholghi, Guido Zuccon, Laurianne Sitbon, Anthony N. Nguyen
Analysis of Word Embeddings and Sequence Features for Clinical Information Extraction. ALTA (2015)
Bevan Koopman, Guido Zuccon, Amol Wagholikar, Kevin Chu, John O'Dwyer, Anthony N. Nguyen, Gerben Keijzers
Automated Reconciliation of Radiology Reports and Discharge Summaries. AMIA (2015)
Bevan Koopman, Sarvnaz Karimi, Anthony N. Nguyen, Rhydwyn McGuire, David Muscatello, Madonna Kemp, Donna Truran, Ming Zhang, Sarah Thackway
Automatic classification of diseases from free-text death certificates for real-time surveillance. BMC Medical Informatics Decis. Mak. 15 (2015)
Hamed Hassanzadeh, Tudor Groza, Anthony N. Nguyen, Jane Hunter
UQeResearch: Semantic Textual Similarity Quantification. SemEval@NAACL-HLT (2015)
Anthony N. Nguyen, Julie Moore, John O'Dwyer, Shoni Colquist
Assessing the Utility of Automatic Cancer Registry Notifications Data Extraction from Free-Text Pathology Reports. AMIA (2015)
Guido Zuccon, Sankalp Khanna, Anthony N. Nguyen, Justin R. Boyle, Matthew Hamlet, Mark A. Cameron
Automatic detection of tweets reporting cases of influenza like illnesses in Australia. Health Inf. Sci. Syst. 3 (1) (2015)
Mahnoosh Kholghi, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen
External Knowledge and Query Strategies in Active Learning: a Study in Clinical Information Extraction. CIKM (2015)
Sarvnaz Karimi, Alejandro Metke-Jimenez, Anthony N. Nguyen
CADEminer: A System for Mining Consumer Reports on Adverse Drug Side Effects. ESAIR@CIKM (2015)
Bevan Koopman, Guido Zuccon, Anthony N. Nguyen, Anton Bergheim, Narelle Grayson
Automatic ICD-10 classification of cancers from free-text death certificates. Int. J. Medical Informatics 84 (11) (2015)
Shahin Mirhosseini, Guido Zuccon, Bevan Koopman, Anthony N. Nguyen, Michael Lawley
Medical Free-Text to Concept Mapping as an Information Retrieval Problem. ADCS (2014)
Mahnoosh Kholghi, Laurianne Sitbon, Guido Zuccon, Anthony N. Nguyen
Factors Influencing Robustness and Effectiveness of Conditional Random Fields in Active Learning Frameworks. AusDM (2014)
Guido Zuccon, Daniel Kotzur, Anthony N. Nguyen, Anton Bergheim
De-identification of health records using Anonym: Effectiveness and robustness across datasets. Artif. Intell. Medicine 61 (3) (2014)
Hamed Hassanzadeh, Tudor Groza, Anthony N. Nguyen, Jane Hunter
Load Balancing for Imbalanced Data Sets: Classifying Scientific Artefacts for Evidence Based Medicine. PRICAI (2014)
Guido Zuccon, Bevan Koopman, Anthony N. Nguyen
Retrieval of Health Advice on the Web AEHRC at ShARe/CLEF eHealth Evaluation Lab Task 3. CLEF (Working Notes) (2013)
Guido Zuccon, Alexander Holloway, Bevan Koopman, Anthony N. Nguyen
Identify Disorders in Health Records using Conditional Random Fields and Metamap AEHRC at ShARe/CLEF 2013 eHealth Evaluation Lab Task 1. CLEF (Working Notes) (2013)
Lavish Lalwani, Guido Zuccon, Mohamed A. Sharaf, Anthony N. Nguyen
Towards a Visually Enhanced Medical Search Engine. AIH+CARE@AUS-AI (2013)
Timothy Chappell, Shlomo Geva, Anthony N. Nguyen, Guido Zuccon
Efficient top-k retrieval with signatures. ADCS (2013)
Guido Zuccon, Anthony N. Nguyen, Anton Bergheim, Sandra Wickman, Narelle Grayson
The impact of OCR accuracy on automated cancer classification of pathology reports. HIC (2012)
Michael Symonds, Guido Zuccon, Bevan Koopman, Peter Bruza, Anthony N. Nguyen
Semantic Judgement of Medical Concepts: Combining Syntagmatic and Paradigmatic Information with the Tensor Encoding Model. ALTA (2012)
Guido Zuccon, Bevan Koopman, Anthony N. Nguyen, Deanne Vickers, Luke Butt
Exploiting medical hierarchies for concept-based information retrieval. ADCS (2012)
Bevan Koopman, Guido Zuccon, Anthony N. Nguyen, Deanne Vickers, Luke Butt, Peter Bruza
Exploiting SNOMED CT Concepts & Relationships for Clinical Information Retrieval: Australian e-Health Research Centre and Queensland University of Technology at the TREC 2012 Medical Track. TREC (2012)
Anthony N. Nguyen, Julie Moore, Guido Zuccon, Michael Lawley, Shoni Colquist
Classification of pathology reports for cancer registry notifications. HIC (2012)
Anthony N. Nguyen, Julie Moore, Michael Lawley, David P. Hansen, Shoni Colquist
Automatic Extraction of Cancer Characteristics from Free-Text Pathology Reports for Cancer Notifications. HIC (2011)
Anthony N. Nguyen, Michael Lawley, David P. Hansen, Rayleen V. Bowman, Belinda E. Clarke, Edwina E. Duhig, Shoni Colquist
Symbolic rule-based classification of lung cancer stages from free-text pathology reports. J. Am. Medical Informatics Assoc. 17 (4) (2010)
Anthony J. Maeder, Jason Dowling, Anthony N. Nguyen, Emma Brunton, Phuong Nguyen
Assuring Authenticity of Digital Mammograms by Image Watermarking. Digital Mammography / IWDM (2008)
Iain McCowan, Darren Moore, Anthony N. Nguyen, Rayleen V. Bowman, Belinda E. Clarke, Edwina E. Duhig, Mary-Jane Fry
Application of Information Technology: Collection of Cancer Stage Data by Classifying Free-text Medical Reports. J. Am. Medical Informatics Assoc. 14 (6) (2007)
Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan
Gaze tracking for region of interest coding in JPEG 2000. Signal Process. Image Commun. 21 (5) (2006)
Chris McCool, Vinod Chandran, Anthony N. Nguyen, Sridha Sridharan
Object Recognition Using Stereo Vision and Higher Order Spectra. DICTA (2005)
Dian Tjondronegoro, Jinglan Zhang, Jinfeng Gu, Anthony N. Nguyen, Shlomo Geva
Integrating Text Retrieval and Image Retrieval in XML Document Searching. INEX (2005)
Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan
Visual attention based roi maps from gaze tracking data. ICIP (2004)
Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan
Importance prioritisation in JPEG 2000 for improved interpretability. Signal Process. Image Commun. 19 (10) (2004)
Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan, Robert Prandolini
Importance prioritization coding in JPEG2000 for interpretability with application to surveillance imagery. VCIP (2003)
Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan, Robert Prandolini
Interpretability performance assessment of JPEG2000 and part 1 compliant region of interest coding. IEEE Trans. Consumer Electron. 49 (4) (2003)
Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan, Robert Prandolini
Progressive coding in JPEG2000 - improving content recognition performance using ROIs and importance maps. EUSIPCO (2002)
Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan, Robert Prandolini
Importance coding of surveillance imagery for interpretability using quadtree dynamic importance maps. ISSPA (2001)
Anthony N. Nguyen, Vinod Chandran, Sridha Sridharan, Robert Prandolini
Importance coding of still imagery based on importance maps of visually interpretable regions. ICIP (3) (2001)