Angelo M. Facchiano

Publication Activity (10 Years)

Years Active: 2000-2021
Publications (10 Years): 11

Top Topics

Exploratory Data Analysis

Computational Approaches

Redescription Mining

Protein Families

Top Venues

Briefings Bioinform.

Publications

Serena Dotolo, Anna Marabotti, Anna Maria Rachiglio, Riziero Esposito Abate, Marco Benedetto, Fortunato Ciardiello, Antonella De Luca, Nicola Normanno, Angelo M. Facchiano, Roberto Tagliaferri
A multiple network-based bioinformatics pipeline for the study of molecular mechanisms in oncological diseases for personalized medicine. Briefings Bioinform. 22 (6) (2021)
Anna Marabotti, Bernardina Scafuri, Angelo M. Facchiano
Predicting the stability of mutant proteins by computational approaches: an overview. Briefings Bioinform. 22 (3) (2021)
Serena Dotolo, Anna Marabotti, Angelo M. Facchiano, Roberto Tagliaferri
A review on drug repurposing applicable to COVID-19. Briefings Bioinform. 22 (2) (2021)
Anna Marabotti, Eugenio Del Prete, Bernardina Scafuri, Angelo M. Facchiano
Performance of Web tools for predicting changes in protein stability caused by mutations. BMC Bioinform. (7) (2021)
Eugenio Del Prete, Angelo M. Facchiano, Pietro Liò
Bioinformatics methodologies for coeliac disease and its comorbidities. Briefings Bioinform. 21 (1) (2020)
Serena Dotolo, Angelo M. Facchiano
Pharmacophore modeling, virtual computational screening and biological evaluation studies. PeerJ Prepr. 5 (2017)
Eugenio Del Prete, Angelo M. Facchiano, Aldo Profumo, Claudia Angelini, Paolo Romano
Suitable reporting for the reproducible research: an added value in the analysis of proteomics data. PeerJ Prepr. 5 (2017)
Paolo Romano, Aldo Profumo, Mattia Rocco, Rosa Mangerini, Fabio Ferri, Angelo M. Facchiano
Geena 2, improved automated analysis of MALDI/TOF mass spectra. BMC Bioinform. 17 (S-4) (2016)
Daniele Ferone, Angelo M. Facchiano, Anna Marabotti, Paola Festa
A new GRASP metaheuristic for biclustering of gene expression data. PeerJ Prepr. 4 (2016)
Eugenio Del Prete, Serena Dotolo, Anna Marabotti, Angelo M. Facchiano
Feature selection on a dataset of protein families: from exploratory data analysis to statistical variable importance. PeerJ Prepr. 4 (2016)
Antonio d'Acierno, Angelo M. Facchiano, Anna Marabotti
GALACTOSEMIA Web DB: A web accessible database of Galactosemia related proteins. PeerJ Prepr. 4 (2016)
Angelo M. Facchiano, Claudia Angelini, Roberta Bosotti, Alessandro Guffanti, Anna Marabotti, Roberto Marangoni, Stefano Pascarella, Paolo Romano, Andreas Zanzoni, Manuela Helmer-Citterich
Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics. BMC Bioinform. 16 (S-9) (2015)
Eugenio Del Prete, Diego d'Esposito, Maria Fiorella Mazzeo, Rosa Anna Siciliano, Angelo M. Facchiano
Comparative Analysis of MALDI-TOF Mass Spectrometric Data in Proteomics: A Case Study. CIBB (2015)
Eugenio Del Prete, Serena Dotolo, Anna Marabotti, Angelo M. Facchiano
Statistical Analysis of Protein Structural Features: Relationships and PCA Grouping. CIBB (2014)
Carmela Gissi, Paolo Romano, Alfredo Ferro, Rosalba Giugno, Alfredo Pulvirenti, Angelo M. Facchiano, Manuela Helmer-Citterich
Bioinformatics in Italy: BITS 2012, the ninth annual meeting of the Italian Society of Bioinformatics. BMC Bioinform. 14 (S-7) (2013)
Anna Marabotti, Corrado Cirielli, Daniela Agnese D'Arcangelo, Claudia Giampietri, Francesco Facchiano, Angelo M. Facchiano, Antonio Facchiano
A Computational Strategy to Investigate Relevant Similarities between Virus and Human Proteins - Local High Similarities between Herpes and Human Proteins. BIOINFORMATICS (2011)
Angelo M. Facchiano, Paola Festa, Anna Marabotti, Luciano Milanesi, Francesco Musacchia
Solving Biclustering with a GRASP-Like Metaheuristic: Two Case-Studies on Gene Expression Analysis. CIBB (2011)
Anna Marabotti, Angelo M. Facchiano
The misuse of terms in scientific literature. Bioinform. 26 (19) (2010)
Antonio d'Acierno, Angelo M. Facchiano, Anna Marabotti
GALT Protein Database, a Bioinformatics Resource for the Management and Analysis of Structural Features of a Galactosemia-related Protein and Its Mutants. Genom. Proteom. Bioinform. 7 (1-2) (2009)
Michele Ceccarelli, Antonio d'Acierno, Angelo M. Facchiano
A scale space approach for unsupervised feature selection in mass spectra classification for ovarian cancer detection. BMC Bioinform. 10 (S-12) (2009)
Anna Marabotti, Francesca Spyrakis, Angelo M. Facchiano, Pietro Cozzini, Saverio Alberti, Glen E. Kellogg, Andrea Mozzarelli
Energy-based prediction of amino acid-nucleotide base recognition. J. Comput. Chem. 29 (12) (2008)
Antonio Mucherino, Susan Costantini, Daniela di Serafino, Marco D'Apuzzo, Angelo M. Facchiano, Giovanni Colonna
Understanding the role of the topology in protein folding by computational inverse folding experiments. Comput. Biol. Chem. 32 (4) (2008)
Margherita Mutarelli, Luigi Cicatiello, Lorenzo Ferraro, Olì M. V. Grober, Maria Ravo, Angelo M. Facchiano, Claudia Angelini, Alessandro Weisz
Time-course analysis of genome-wide gene expression data from hormone-responsive human breast cancer cells. BMC Bioinform. 9 (S-2) (2008)
Michele Ceccarelli, Antonio d'Acierno, Angelo M. Facchiano
A Machine Learning Approach to Mass Spectra Classification with Unsupervised Feature Selection. CIBB (2008)
Susan Costantini, Giovanni Colonna, Angelo M. Facchiano
FASMA: A Service to Format and Analyze Sequences in Multiple Alignments. Genom. Proteom. Bioinform. 5 (3-4) (2007)
Susan Costantini, Giovanni Colonna, Angelo M. Facchiano
Simulation of conformational changes occurring when a protein interacts with its receptor. Comput. Biol. Chem. 31 (3) (2007)
Susan Costantini, Giovanni Colonna, Angelo M. Facchiano
PreSSAPro: A software for the prediction of secondary structure by amino acid properties. Comput. Biol. Chem. 31 (5-6) (2007)
Anna Marabotti, Giovanni Colonna, Angelo M. Facchiano
New computational strategy to analyze the interactions of ER alpha and ER beta with different ERE sequences. J. Comput. Chem. 28 (6) (2007)
Angelo M. Facchiano, Antonio Facchiano, Francesco Facchiano
Active Sequences Collection (ASC) database: a new tool to assign functions to protein sequences. Nucleic Acids Res. 31 (1) (2003)
Angelo M. Facchiano
HELM: searching for helix motifs within protein sequences. Bioinform. 16 (3) (2000)