Angel Rubio

Publication Activity (10 Years)

Years Active: 2003-2023
Publications (10 Years): 6

Top Topics

Computational Approaches

High Dimensionality

Gene Expression

Metabolic Networks

Top Venues

Briefings Bioinform.

Publications

Max Rossmannek, Fabijan Pavosevic, Angel Rubio, Ivano Tavernelli
Quantum Embedding Method for the Simulation of Strongly Correlated Systems on Quantum Computers. CoRR (2023)
Marian Gimeno, Katyna Sada del Real, Angel Rubio
Precision oncology: a review to assess interpretability in several explainable methods. Briefings Bioinform. 24 (4) (2023)
Juan A. Ferrer-Bonsoms, Xabier Morales, Pegah T. Afshar, Wing H. Wong, Angel Rubio
On the identifiability of the isoform deconvolution problem: application to select the proper fragment length in an RNA-seq library. Bioinform. 38 (6) (2022)
Jason Kaye, Alex H. Barnett, Leslie Greengard, Umberto De Giovannini, Angel Rubio
Eliminating artificial boundary conditions in time-dependent density functional theory using Fourier contour deformation. CoRR (2022)
Juan A. Ferrer-Bonsoms, Laura Jareno, Angel Rubio
Rediscover: an R package to identify mutually exclusive mutations. Bioinform. 38 (3) (2022)
Fernando Carazo, Juan P. Romero, Angel Rubio
Upstream analysis of alternative splicing: a review of computational approaches to predict context-dependent splicing factors. Briefings Bioinform. 20 (4) (2019)
Angel Rubio, Fernando de Villar
Code Profiling in R: A Review of Existing Methods and an Introduction to Package GUIProfiler. R J. 7 (2) (2015)
Joseba Alberdi-Rodriguez, Micael J. T. Oliveira, Pablo García-Risueño, Fernando Nogueira, Javier Muguerza, Agustin Arruabarrena, Angel Rubio
Recent Memory and Performance Improvements in Octopus Code. ICCSA (4) (2014)
Iker Mesa, Angel Rubio, Imanol Tubia, Joaquín de No, Javier Díaz
Channel and feature selection for a surface electromyographic pattern recognition task. Expert Syst. Appl. 41 (11) (2014)
Pablo García-Risueño, Joseba Alberdi-Rodriguez, Micael J. T. Oliveira, Xavier Andrade, Michael Pippig, Javier Muguerza, Agustin Arruabarrena, Angel Rubio
A survey of the parallel performance and accuracy of Poisson solvers for electronic structure calculations. J. Comput. Chem. 35 (6) (2014)
Alberto Rezola, Jon Pey, Luis F. de Figueiredo, Adam Podhorski, Stefan Schuster, Angel Rubio, Francisco J. Planes
Selection of human tissue-specific elementary flux modes using gene expression data. Bioinform. 29 (16) (2013)
Jon Pey, Kaspar Valgepea, Angel Rubio, John E. Beasley, Francisco J. Planes
Integrating gene and protein expression data with genome-scale metabolic networks to infer functional pathways. BMC Syst. Biol. 7 (2013)
Ander Muniategui, Jon Pey, Francisco J. Planes, Angel Rubio
Joint analysis of miRNA and mRNA expression data. Briefings Bioinform. 14 (3) (2013)
Maria Ortiz-Estevez, Ander Aramburu, Angel Rubio
Getting DNA copy numbers without control samples. Algorithms Mol. Biol. 7 (2012)
Iker Mesa, Angel Rubio, Javier Díaz, Jon Legarda, Beatriz Sedano
Reducing the Number of Channels and Signal-features for an Accurate Classification in an EMG Pattern Recognition Task. BIOSIGNALS (2012)
Maria Ortiz-Estevez, Ander Aramburu, Henrik Bengtsson, Pierre Neuvial, Angel Rubio
CalMaTe: a method and software to improve allele-specific copy number of SNP arrays for downstream segmentation. Bioinform. 28 (13) (2012)
Jon Pey, Constantinos Theodoropoulos, Alberto Rezola, Angel Rubio, Marta Cascante, Francisco J. Planes
Do elementary flux modes combine linearly at the "atomic" level? Integrating tracer-based metabolomics data and elementary flux modes. Biosyst. 105 (2) (2011)
Maria Ortiz-Estevez, Henrik Bengtsson, Angel Rubio
ACNE: a summarization method to estimate allele-specific copy numbers for Affymetrix SNP arrays. Bioinform. 26 (15) (2010)
Miguel Ángel Antón, Ander Aramburu, Angel Rubio
Improvements to previous algorithms to predict gene structure and isoform concentrations using Affymetrix Exon arrays. BMC Bioinform. 11 (2010)
Luis F. de Figueiredo, Adam Podhorski, Angel Rubio, Christoph Kaleta, John E. Beasley, Stefan Schuster, Francisco J. Planes
Computing the shortest elementary flux modes in genome-scale metabolic networks. Bioinform. 25 (23) (2009)
Elizabeth Guruceaga, Victor Segura, Fernando J. Corrales, Angel Rubio
FactorY, a bioinformatic resource for genome-wide promoter analysis. Comput. Biol. Medicine 39 (4) (2009)
José L. Sevilla Campo, Victor Segura, Adam Podhorski, Elizabeth Guruceaga, Jose M. Mato, Luis A. Martínez-Cruz, Fernando J. Corrales, Angel Rubio
Correlation between Gene Expression and GO Semantic Similarity. IEEE ACM Trans. Comput. Biol. Bioinform. 2 (4) (2005)
Luis A. Martínez-Cruz, Angel Rubio, María L. Martínez-Chantar, Alberto Labarga, Isabel Barrio, Adam Podhorski, Victor Segura, José L. Sevilla Campo, Matías A. Avila, Jose M. Mato
GARBAN: genomic analysis and rapid biological annotation of cDNA microarray and proteomic data. Bioinform. 19 (16) (2003)