Anastasia Krithara

Publication Activity (10 Years)

Years Active: 2008-2024
Publications (10 Years): 61

Top Topics

Transfer Learning

Semantic Indexing

Biomedical Literature

Question Answering

Top Venues

CLEF (Working Notes)

Publications

Anastasia Krithara, Fotis Aisopos, Vassiliki Rentoumi, Anastasios Nentidis, Konstantinos Bougiatiotis, Maria-Esther Vidal, Ernestina Menasalvas, Alejandro Rodríguez González, Eleftherios Samaras, Peter Garrard, Maria Torrente, Mariano Provencio Pulla, Nikos Dimakopoulos, Rui Mauricio, Jordi Rambla De Argila, Gian Gaetano Tartaglia, George Paliouras
iASiS: Towards Heterogeneous Big Data Analysis for Personalized Medicine. CoRR (2024)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Georgios Paliouras
Overview of BioASQ Tasks 12b and Synergy12 in CLEF2024. CLEF (Working Notes) (2024)
Salvador Lima-López, Eulàlia Farré-Maduell, Jan Rodríguez-Miret, Miguel Rodríguez-Ortega, Livia Lilli, Jacopo Lenkowicz, Giovanna Ceroni, Jonathan Kossof, Anoop Shah, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger
Overview of MultiCardioNER task at BioASQ 2024 on Medical Specialty and Language Adaptation of Clinical NER Systems for Spanish, English and Italian. CLEF (Working Notes) (2024)
Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Martin Krallinger, Luis Gascó Sánchez, Salvador Lima-López, Eulàlia Farré, Natalia V. Loukachevitch, Vera Davydova, Elena Tutubalina
BioASQ at CLEF2024: The Twelfth Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge. ECIR (5) (2024)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Martin Krallinger, Georgios Paliouras
Overview of BioASQ 2023: The Eleventh BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CLEF (2023)
Anastasios Nentidis, Thomas Chatzopoulos, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
Large-scale fine-grained semantic indexing of biomedical literature based on weakly-supervised deep learning. CoRR (2023)
Anastasia Krithara, James G. Mork, Anastasios Nentidis, Georgios Paliouras
The road from manual to automatic semantic indexing of biomedical literature: a 10 years journey. Frontiers Res. Metrics Anal. 8 (2023)
Anastasios Nentidis, Thomas Chatzopoulos, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
Large-scale investigation of weakly-supervised deep learning for the fine-grained semantic indexing of biomedical literature. J. Biomed. Informatics 146 (2023)
Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger
Overview of MedProcNER Task on Medical Procedure Detection and Entity Linking at BioASQ 2023. CLEF (Working Notes) (2023)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Georgios Paliouras
Overview of BioASQ Tasks 11b and Synergy11 in CLEF2023. CLEF (Working Notes) (2023)
Ahmad Sakor, Samaneh Jozashoori, Emetis Niazmand, Ariam Rivas, Konstantinos Bougiatiotis, Fotis Aisopos, Enrique Iglesias, Philipp D. Rohde, Trupti Padiya, Anastasia Krithara, Georgios Paliouras, Maria-Esther Vidal
Knowledge4COVID-19: A semantic-based approach for constructing a COVID-19 related knowledge graph from various sources and analyzing treatments' toxicities. J. Web Semant. 75 (2023)
Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Martin Krallinger, Georgios Paliouras
Overview of BioASQ 2023: The eleventh BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CoRR (2023)
Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Eulàlia Farré-Maduell, Salvador Lima-López, Martin Krallinger
BioASQ at CLEF2023: The Eleventh Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge. ECIR (3) (2023)
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Georgios Paliouras
Overview of BioASQ Tasks 10a, 10b and Synergy10 in CLEF2022. CLEF (Working Notes) (2022)
Antonio Miranda-Escalada, Luis Gascó, Salvador Lima-López, Eulàlia Farré-Maduell, Darryl Estrada, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger
Overview of DisTEMIST at BioASQ: Automatic detection and normalization of diseases from clinical texts: results, methods, evaluation and multilingual resources. CLEF (Working Notes) (2022)
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Antonio Miranda-Escalada, Luis Gascó, Martin Krallinger, Georgios Paliouras
Overview of BioASQ 2022: The tenth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CoRR (2022)
Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Luis Gascó, Martin Krallinger
BioASQ at CLEF2022: The Tenth Edition of the Large-scale Biomedical Semantic Indexing and Question Answering Challenge. ECIR (2) (2022)
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Antonio Miranda-Escalada, Luis Gascó, Martin Krallinger, Georgios Paliouras
Overview of BioASQ 2022: The Tenth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CLEF (2022)
Vasileios Konstantakos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras
CRISPRedict: a CRISPR-Cas9 web tool for interpretable efficiency predictions. Nucleic Acids Res. 50 (W1) (2022)
Eleni Koutsoni, Vasileios Konstantakos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras
Modeling the off-target effects of CRISPR-Cas9 experiments for the treatment of Duchenne Muscular Dystrophy. SETN (2022)
Ahmad Sakor, Samaneh Jozashoori, Emetis Niazmand, Ariam Rivas, Konstantinos Bougiatiotis, Fotis Aisopos, Enrique Iglesias, Philipp D. Rohde, Trupti Padiya, Anastasia Krithara, Georgios Paliouras, Maria-Esther Vidal
Knowledge4COVID-19: A Semantic-based Approach for Constructing a COVID-19 related Knowledge Graph from Various Sources and Analysing Treatments' Toxicities. CoRR (2022)
Anastasia Krithara, Anastasios Nentidis, Georgios Paliouras, Martin Krallinger, Antonio Miranda
BioASQ at CLEF2021: Large-Scale Biomedical Semantic Indexing and Question Answering. ECIR (2) (2021)
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Luis Gascó, Martin Krallinger, Georgios Paliouras
Overview of BioASQ 2021: The Ninth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CLEF (2021)
Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Martin Krallinger, Carlos Rodríguez Penagos, Marta Villegas, Georgios Paliouras
Overview of BioASQ 2020: The eighth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CoRR (2021)
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Georgios Paliouras
Overview of BioASQ Tasks 9a, 9b and Synergy in CLEF2021. CLEF (Working Notes) (2021)
Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Luis Gascó, Martin Krallinger, Georgios Paliouras
Overview of BioASQ 2021: The ninth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CoRR (2021)
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
Harvesting the Public MeSH Note field. CoRR (2021)
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
What is all this new MeSH about? Int. J. Digit. Libr. 22 (4) (2021)
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
What is all this new MeSH about? Exploring the semantic provenance of new descriptors in the MeSH thesaurus. CoRR (2021)
Luis Gascó, Anastasios Nentidis, Anastasia Krithara, Darryl Estrada-Zavala, Renato Toshiyuki Murasaki, Elena Primo-Peña, Cristina Bojo-Canales, Georgios Paliouras, Martin Krallinger
Overview of BioASQ 2021-MESINESP track. Evaluation of advance hierarchical classification techniques for scientific literature, patents and clinical trials. CLEF (Working Notes) (2021)
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras
iASiS Open Data Graph: Automated Semantic Integration of Disease-Specific Knowledge. CBMS (2020)
Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Georgios Paliouras
Overview of BioASQ 8a and 8b: Results of the Eighth Edition of the BioASQ Tasks a and b. CLEF (Working Notes) (2020)
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras
Results of the seventh edition of the BioASQ Challenge. CoRR (2020)
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
Beyond MeSH: Fine-Grained Semantic Indexing of Biomedical Literature based on Weak Supervision. CoRR (2020)
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
Beyond MeSH: Fine-grained semantic indexing of biomedical literature based on weak supervision. Inf. Process. Manag. 57 (5) (2020)
Carlos Rodríguez Penagos, Anastasios Nentidis, Aitor Gonzalez-Agirre, Alejandro Asensio, Jordi Armengol-Estapé, Anastasia Krithara, Marta Villegas, Georgios Paliouras, Martin Krallinger
Overview of MESINESP, a Spanish Medical Semantic Indexing Task within BioASQ 2020. CLEF (Working Notes) (2020)
Despoina Kalfakakou, Anastasia Krithara, Georgios Paliouras
Splice site prediction across different organisms: A transfer learning approach. SETN (2020)
Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Martin Krallinger, Carlos Rodríguez Penagos, Marta Villegas, Georgios Paliouras
Overview of BioASQ 2020: The Eighth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CLEF (2020)
Konstantinos Bougiatiotis, Fotis Aisopos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras
Drug-Drug Interaction Prediction on a Biomedical Literature Knowledge Graph. AIME (2020)
Martin Krallinger, Anastasia Krithara, Anastasios Nentidis, Georgios Paliouras, Marta Villegas
BioASQ at CLEF2020: Large-Scale Biomedical Semantic Indexing and Question Answering. ECIR (2) (2020)
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras
Semantic integration of disease-specific knowledge. CoRR (2019)
Anastasia Krithara, Fotis Aisopos, Vassiliki Rentoumi, Anastasios Nentidis, Konstantinos Bougiatiotis, Maria-Esther Vidal, Ernestina Menasalvas, Alejandro Rodríguez González, Eleftherios Samaras, Peter Garrard, Maria Torrente, Mariano Provencio Pulla, Nikos Dimakopoulos, Rui Mauricio, Jordi Rambla De Argila, Gian Gaetano Tartaglia, George Paliouras
iASiS: Towards Heterogeneous Big Data Analysis for Personalized Medicine. CBMS (2019)
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras
Results of the Seventh Edition of the BioASQ Challenge. PKDD/ECML Workshops (2) (2019)
Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras
Beyond MeSH: Fine-Grained Semantic Indexing of Biomedical Literature Based on Weak Supervision. CBMS (2019)
Frank Hopfgartner, Allan Hanbury, Henning Müller, Ivan Eggel, Krisztian Balog, Torben Brodt, Gordon V. Cormack, Jimmy Lin, Jayashree Kalpathy-Cramer, Noriko Kando, Makoto P. Kato, Anastasia Krithara, Tim Gollub, Martin Potthast, Evelyne Viegas, Simon Mercer
Evaluation-as-a-Service for the Computational Sciences: Overview and Outlook. ACM J. Data Inf. Qual. 10 (4) (2018)
Manolis Koubarakis, George A. Vouros, Georgios Chalkiadakis, Vassilis P. Plagianakos, Christos Tjortjis, Ergina Kavallieratou, Dimitris Vrakas, Nikolaos Mavridis, Georgios Petasis, Konstantinos Blekas, Anastasia Krithara
AI in Greece: The Case of Research on Linked Geospa al Data. AI Mag. 39 (2) (2018)
Foteini Kollintza-Kyriakoulia, Manolis Maragoudakis, Anastasia Krithara
Measuring the Impact of Financial News and Social Media on Stock Market Modeling Using Time Series Mining Techniques. Algorithms 11 (11) (2018)
Ricardo Usbeck, Axel-Cyrille Ngonga Ngomo, Bastian Haarmann, Anastasia Krithara, Michael Röder, Giulio Napolitano
7th Open Challenge on Question Answering over Linked Data (QALD-7). SemWebEval@ESWC (2017)
Simos Kazantzidis, Anastasia Krithara, George Paliouras
Splice Site Prediction: Transferring Knowledge Across Organisms. BIOINFORMATICS (2017)
Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras, Ioannis A. Kakadiaris
Results of the fifth edition of the BioASQ Challenge. BioNLP (2017)
Konstantinos Bougiatiotis, Anastasia Krithara
Author Profiling using Complementary Second Order Attributes and Stylometric Features. CLEF (Working Notes) (2016)
Lorraine Goeuriot, Steven Bedrick, Gareth J. F. Jones, Anastasia Krithara, Henning Müller, George Paliouras
Report on the SIGIR 2016 Workshop on Medical Information Retrieval (MedIR). SIGIR Forum 50 (2) (2016)
Steven Bedrick, Lorraine Goeuriot, Gareth J. F. Jones, Anastasia Krithara, Henning Müller, George Paliouras
Medical Information Search Workshop (MEDIR). SIGIR (2016)
George Tsatsaronis, Georgios Balikas, Prodromos Malakasiotis, Ioannis Partalas, Matthias Zschunke, Michael R. Alvers, Dirk Weissenborn, Anastasia Krithara, Sergios Petridis, Dimitris Polychronopoulos, Yannis Almirantis, John Pavlopoulos, Nicolas Baskiotis, Patrick Gallinari, Thierry Artières, Axel-Cyrille Ngonga Ngomo, Norman Heino, Éric Gaussier, Liliana Barrio-Alvers, Michael Schroeder, Ion Androutsopoulos, Georgios Paliouras
An overview of the BIOASQ large-scale biomedical semantic indexing and question answering competition. BMC Bioinform. 16 (2015)
Allan Hanbury, Henning Müller, Krisztian Balog, Torben Brodt, Gordon V. Cormack, Ivan Eggel, Tim Gollub, Frank Hopfgartner, Jayashree Kalpathy-Cramer, Noriko Kando, Anastasia Krithara, Jimmy Lin, Simon Mercer, Martin Potthast
Evaluation-as-a-Service: Overview and Outlook. CoRR (2015)
Gregory Katsios, Svitlana Vakulenko, Anastasia Krithara, Georgios Paliouras
Towards Open Domain Event Extraction from Twitter: REVEALing Entity Relations. DeRiVE@ESWC (2015)
Georgios Balikas, Aris Kosmopoulos, Anastasia Krithara, Georgios Paliouras, Ioannis A. Kakadiaris
Results of the BioASQ Tasks of the Question Answering Lab at CLEF 2015. CLEF (Working Notes) (2015)
Georgios Balikas, Anastasia Krithara, Ioannis Partalas, George Paliouras
BioASQ: A Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. MRDM@ECIR (2015)
Andreas Grivas, Anastasia Krithara, George Giannakopoulos
Author Profiling using Stylometric and Structural Feature Groupings. CLEF (Working Notes) (2015)
Katerina Andreadou, Symeon Papadopoulos, Lazaros Apostolidis, Anastasia Krithara, Yiannis Kompatsiaris
Media REVEALr: A Social Multimedia Monitoring and Intelligence System for Web Multimedia Verification. PAISI (2015)
Frank Hopfgartner, Allan Hanbury, Henning Müller, Noriko Kando, Simon Mercer, Jayashree Kalpathy-Cramer, Martin Potthast, Tim Gollub, Anastasia Krithara, Jimmy Lin, Krisztian Balog, Ivan Eggel
Report on the Evaluation-as-a-Service (EaaS) Expert Workshop. SIGIR Forum 49 (1) (2015)
Georgios Giannoulis, Anastasia Krithara, Christos Karatsalos, Georgios Paliouras
Splice Site Recognition Using Transfer Learning. SETN (2014)
Georgios Balikas, Ioannis Partalas, Axel-Cyrille Ngonga Ngomo, Anastasia Krithara, Georgios Paliouras
Results of the BioASQ Track of the Question Answering Lab at CLEF 2014. CLEF (Working Notes) (2014)
Dimitris Polychronopoulos, Anastasia Krithara, Christoforos Nikolaou, Georgios Paliouras, Yannis Almirantis, George Giannakopoulos
Analysis and Classification of Constrained DNA Elements with N-gram Graphs and Genomic Signatures. AlCoB (2014)
Anastasia Krithara, Georgios Paliouras
TL-PLSA: Transfer Learning between Domains with Different Classes. ICDM (2013)
Anastasia Krithara, Massih-Reza Amini, Cyril Goutte, Jean-Michel Renders
Learning aspect models with partially labeled data. Pattern Recognit. Lett. 32 (2) (2011)
Anastasia Krithara, Massih-Reza Amini, Cyril Goutte, Jean-Michel Renders
An Extension of the Aspect PLSA Model to Active and Semi-Supervised Learning for Text Classification. SETN (2010)
Anastasia Krithara, Massih-Reza Amini, Jean-Michel Renders, Cyril Goutte
Semi-supervised Document Classification with a Mislabeling Error Model. ECIR (2008)