Amir A. Amini

Publication Activity (10 Years)

Years Active: 1988-2023
Publications (10 Years): 27

Top Topics

Cardiac Motion Estimation

Magnetic Resonance

Top Venues

Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging

IEEE J. Biomed. Health Informatics

Publications

Tyler Settle, Benjamin Veasey, Albert Seow, Amir A. Amini
Performance of a bank of 2D efficient-nets for benign/malignant classification of lung nodules in 3D thoracic x-ray CT scans. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2023)
Aryan Ghazipour, Tyler Settle, Benjamin Veasey, Emily Daugherty, Samuel Keltner, Nitin Kumar, James Ververs, Michael Farris, Neal Dunlap, Amir A. Amini
Survival Outcome Prediction for Stereotactic Body Radiation Therapy of Lung Cancer from Post-RT Ct Images with RNN/CNN Deep Learning. ISBI (2023)
Amirkhosro Kazemi, Marcus F. Stoddard, Amir A. Amini
TKE-Net: Deep Learning for Estimation of Super-Resolved Turbulent Kinetic Energy Maps from 4D-Flow MRI Data. ISBI (2023)
Amirkhosro Kazemi, Sean Callahan, Marcus F. Stoddard, Amir A. Amini
Estimation of hemodynamic parameters with deep-learning-based super-resolved 4D flow MRI velocity data. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2023)
Amirkhosro Kazemi, Marcus F. Stoddard, Amir A. Amini
Reduced-order modeling of 4D flow MRI and CFD in stenotic flow using Proper Orthogonal Decomposition (POD) and Dynamic Mode Decomposition (DMD). Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2022)
Ruponti Nath, Sean Callahan, Marcus F. Stoddard, Amir A. Amini
FlowRAU-Net: Accelerated 4D Flow MRI of Aortic Valvular Flows With a Deep 2D Residual Attention Network. IEEE Trans. Biomed. Eng. 69 (12) (2022)
Aryan Ghazipour, Benjamin Veasey, Albert Seow, Amir A. Amini
Joint Learning for Deformable Registration and Malignancy Classification of Lung Nodules. ISBI (2021)
Amirkhosro Kazemi, Ruponti Nath, M. J. Negahdar, Marcus Stodddard, Amir A. Amini
4D flow MRI and CFD simulations of pulsatile flow in a phantom model of arterial stenosis: visualizing the vortex dynamics. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2021)
Yoganand Balagurunathan, Andrew Beers, Michael F. McNitt-Gray, Lubomir M. Hadjiiski, Sandy Napel, Dmitry B. Goldgof, Gustavo Pérez, Pablo Arbelaez, Alireza Mehrtash, Tina Kapur, Ehwa Yang, Jung Won Moon, Gabriel Bernardino Perez, Ricard Delgado-Gonzalo, Mohammad Mehdi Farhangi, Amir A. Amini, Renkun Ni, Xue Feng, Aditya Bagari, Kiran Vaidhya, Benjamin Veasey, Wiem Safta, Hichem Frigui, Joseph Enguehard, Ali Gholipour, Laura Silvana Castillo, Laura Alexandra Daza, Paul F. Pinsky, Jayashree Kalpathy-Cramer, Keyvan Farahani
Lung Nodule Malignancy Prediction in Sequential CT Scans: Summary of ISBI 2018 Challenge. IEEE Trans. Medical Imaging 40 (12) (2021)
Aryan Ghazipour, Benjamin Veasey, Albert Seow, Amir A. Amini
3D U-net for registration of lung nodules in longitudinal CT scans. Medical Imaging: Computer-Aided Diagnosis (2021)
Ruponti Nath, Amirkhosro Kazemi, Sean Callahan, M. J. Negahdar, Marcus F. Stoddard, Amir A. Amini
A 1D encoder-decoder deep network for pressure estimation from 4D flow MRI: in-vitro experiments. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2021)
William Funke, Benjamin Veasey, Jacek M. Zurada, Hichem Frigui, Amir A. Amini
3D U-Net for segmentation of pulmonary nodules in volumetric CT scans from multi-annotator truth estimation. Medical Imaging: Computer-Aided Diagnosis (2020)
Andreas S. Panayides, Amir A. Amini, Nenad D. Filipovic, Ashish Sharma, Sotirios A. Tsaftaris, Alistair A. Young, David J. Foran, Nhan Do, Spyretta Golemati, Tahsin M. Kurç, Kun Huang, Konstantina S. Nikita, Ben P. Veasey, Michalis E. Zervakis, Joel H. Saltz, Constantinos S. Pattichis
AI in Medical Imaging Informatics: Current Challenges and Future Directions. IEEE J. Biomed. Health Informatics 24 (7) (2020)
Amir A. Amini, Wei Chen, Giancarlo Fortino, Ye Li, Yi Pan, May Dongmei Wang
Editorial Special Issue on "AI-Driven Informatics, Sensing, Imaging and Big Data Analytics for Fighting the COVID-19 Pandemic". IEEE J. Biomed. Health Informatics 24 (10) (2020)
Ruponti Nath, Sean Callahan, Narayana Singam, Marcus F. Stoddard, Amir A. Amini
Accelerated Phase Contrast Magnetic Resonance Imaging via Deep Learning. ISBI (2020)
Benjamin Veasey, Mohammad Mehdi Farhangi, Hichem Frigui, Justin Broadhead, Michael Dahle, Aria Pezeshk, Albert Seow, Amir A. Amini
Lung Nodule Malignancy Classification Based ON NLSTx Data. ISBI (2020)
Benjamin Veasey, Shahab Ghafghazi, Amir A. Amini
A comparative study of graph search algorithms for segmenting coronary arteries from cine angiography. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2019)
Wiem Safta, Mohammad Mehdi Farhangi, Benjamin Veasey, Amir A. Amini, Hichem Frigui
Multiple Instance Learning for Malignant vs. Benign Classification of Lung Nodules in Thoracic Screening Ct Data. ISBI (2019)
Alex Henn, Sean Callahan, Michael Kendrick, Arash Kheradvar, Amir A. Amini
An MR compatible aortic arch phantom with calcific polymeric valves. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2019)
Sean Callahan, Alex Henn, Michael Kendrick, Hui Wang, M. J. Negahdar, Arash Kheradvar, Marcus F. Stoddard, Amir A. Amini
4D Dual-Venc Spiral Flow. EMBC (2018)
Jung won Cha, Neal Dunlap, Amir A. Amini
Statistical correlation of CT ventilation imaging and V/Q spect in patients with lung cancer. ISBI (2018)
Jungwon Cha, Alex Henn, Marcus F. Stoddard, Amir A. Amini
3D segmentation of the ascending and descending aorta from CT data via graph-cuts. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2018)
Jung won Cha, Mohammad Mehdi Farhangi, Neal Dunlap, Amir A. Amini
Volumetric analysis of respiratory gated whole lung and liver CT data with motion-constrained graph cuts segmentation. EMBC (2017)
Mohammad Mehdi Farhangi, Hichem Frigui, Albert Seow, Amir A. Amini
3-D Active Contour Segmentation Based on Sparse Linear Combination of Training Shapes (SCoTS). IEEE Trans. Medical Imaging 36 (11) (2017)
Jung won Cha, Mohammad Mehdi Farhangi, Neal Dunlap, Amir A. Amini
4D lung tumor segmentation via shape prior and motion cues. EMBC (2016)
Mohammad Mehdi Farhangi, Hichem Frigui, Robert Bert, Amir A. Amini
Incorporating shape prior into active contours with a sparse linear combination of training shapes: Application to corpus callosum segmentation. EMBC (2016)
Jung won Cha, Neal Dunlap, Brian Wang, Amir A. Amini
3D segmentation of lung CT data with graph-cuts: analysis of parameter sensitivities. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2016)
Vahid Tavakoli, Nirman Bhatia, Rita A. Longaker, Marcus F. Stoddard, Amir A. Amini
Tissue Doppler Imaging Optical Flow (TDIOF): A Combined B-Mode and Tissue Doppler Approach for Cardiac Motion Estimation in Echocardiographic Images. IEEE Trans. Biomed. Eng. 61 (8) (2014)
Mo Kadbi, Mohammadreza Negahdar, Melanie Traughber, Peter Martin, Amir A. Amini
Assessment of flow and hemodynamics in the carotid artery using a reduced TE 4D flow spiral phase-contrast MRI. EMBC (2013)
Vahid Tavakoli, Amir A. Amini
A survey of shaped-based registration and segmentation techniques for cardiac images. Comput. Vis. Image Underst. 117 (9) (2013)
Hui Wang, Christian T. Stoeck, Sebastian Kozerke, Amir A. Amini
Analysis of 3D cardiac deformations with 3D SinMod. EMBC (2013)
Mohammadreza Negahdar, Neal Dunlap, Albert Zacarias, A. Cahid Civelek, Shiao Y. Woo, Amir A. Amini
Comparison of indices of regional lung function from 4-D X-ray CT: Jacobian vs. strain of deformation. ISBI (2013)
M. J. Negahdar, Mo Kadbi, J. Cha, J. Cebral, Amir A. Amini
Noninvasive 3D pressure calculation from PC-MRI via non-iterative harmonics-based orthogonal projection: Constant flow experiment. EMBC (2013)
Hui Wang, Amir A. Amini
Cardiac Motion and Deformation Recovery From MRI: A Review. IEEE Trans. Medical Imaging 31 (2) (2012)
Mohammadreza Negahdar, Amir A. Amini
Regional lung strains via a volumetric mass conserving optical flow model. ISBI (2012)
Mo Kadbi, Hui Wang, M. J. Negahdar, Lizette Warner, Melanie Traughber, Peter Martin, Amir A. Amini
A novel phase-corrected 3D cine ultra-short te (UTE) phase-contrast MRI technique. EMBC (2012)
Mo Kadbi, M. J. Negahdar, Jung won Cha, Melanie Traughber, Peter Martin, Amir A. Amini
Validation of 3D ultra-short TE (UTE) Phase-Contrast MRI for imaging of steady flow: Initial phantom experiments. EMBC (2012)
Mohammadreza Negahdar, Jong Cha, Mostafa Shakeri, Michael Kendrick, Motaz Alshaher, Iman Khodarahimi, M. K. Sharp, A. Yancey, J. Heidenreich, Amir A. Amini
Effect of Venc on accuracy of velocity profiles in multi-slice phase-contrast MR imaging of stenotic flow. ISBI (2012)
Vahid Tavakoli, M. J. Negahdar, Michael Kendrick, Motaz Alshaher, Marcus F. Stoddard, Amir A. Amini
A biventricular multimodal (MRI/ultrasound) cardiac phantom. EMBC (2012)
Hui Wang, Mo Kadbi, Melanie Kotys, Mehmet Ersoy, George P. Chatzimavroudis, Randolph M. Setser, Motaz Alshaher, Stefan E. Fischer, Amir A. Amini
Orthogonal CSPAMM (OCSPAMM) MR tagging for imaging ventricular wall motion. EMBC (2011)
Mohammadreza Negahdar, Amir A. Amini
Estimation of affine motion from projection data using a mass conservation model. EMBC (2011)
Mohammadreza Negahdar, Amir A. Amini
Planar deformable motion estimation incorporating mass conservation and image gradient constancy. ISBI (2011)
Mo Kadbi, Melanie Kotys, Motaz Alshaher, Stefan E. Fischer, Amir A. Amini
An improved real-time cine Late Gadolinium Enhancement (LGE) imaging method at 3T. EMBC (2011)
M. J. Negahdar, Mo Kadbi, Melanie Kotys, Motaz Alshaher, Stefan E. Fischer, Amir A. Amini
Rapid flow quantification in iliac arteries with spiral phase-contrast MRI. EMBC (2011)
Mohammadreza Negahdar, Amir A. Amini
Multi-scale optical flow including normalized mutual information for planar deformable lung motion estimation from 4D CT. EMBC (2011)
Behnaz Abdollahi, Ayman El-Baz, Amir A. Amini
A multi-scale non-linear vessel enhancement technique. EMBC (2011)
Amir A. Amini, Jian Chen, Yuehuan Wang
Imaging and Analysis for Determination of Cardiovascular Mechanics. ISBI (2007)
Nicholas J. Tustison, Amir A. Amini
Biventricular myocardial strains via nonrigid registration of AnFigatomical NURBS models. IEEE Trans. Medical Imaging 25 (1) (2006)
Yuehuan Wang, Amir A. Amini
Integrable Pressure Gradients via Harmonics-Based Orthogonal Projection. IPMI (2005)
Alejandro F. Frangi, Amir A. Amini, Elizabeth Bullitt
Vascular Imaging. IEEE Trans. Medical Imaging 24 (4) (2005)
Nicholas J. Tustison, Dana Abendschein, Amir A. Amini
Biventricular Myocardial Kinematics Based on Tagged MRI from Anatomical NURBS Models. CVPR (2) (2004)
Jian Chen, Amir A. Amini
Quantifying 3-D vascular structures in MRA images using hybrid PDE and geometric deformable models. IEEE Trans. Medical Imaging 23 (10) (2004)
Nicholas J. Tustison, Victor G. Dávila-Román, Amir A. Amini
Myocardial kinematics from tagged MRI based on a 4-D B-spline model. IEEE Trans. Biomed. Eng. 50 (8) (2003)
N. Fatouraee, Amir A. Amini
Regularization of Flow Streamlines in Multislice Phase-Contrast MRI. IEEE Trans. Medical Imaging 22 (6) (2003)
Nicholas J. Tustison, Dana Abendschein, Victor G. Dávila-Román, Amir A. Amini
Myocardial Strain Imaging with Tagged MRI. ICPR (1) (2002)
Yasheng Chen, Amir A. Amini
A MAP Framework for Tag Line Detection in SPAMM Data Using Markov Random Fields on the B-Spline Solid. IEEE Trans. Medical Imaging 21 (9) (2002)
Amir A. Amini, Yasheng Chen, Mohamed Elayyadi, Petia Radeva
Tag Surface Reconstruction and Tracking of Myocardial Beads from SPAMM-MRI with Parametric B-Spline Surfaces. IEEE Trans. Medical Imaging 20 (2) (2001)
Yu-Ping Wang, Yasheng Chen, Amir A. Amini
Fast LV Motion Estimation Using Subspace Approximation Techniques. IEEE Trans. Medical Imaging 20 (6) (2001)
Jiantao Huang, Amir A. Amini
Four-Dimensional LV Tissue Tracking from Tagged MRI with a 4D B-Spline Model. IPMI (1999)
Jiantao Huang, Dana Abendschein, Victor G. Dávila-Román, Amir A. Amini
Spatio-Temporal Tracking of Myocardial Deformation with a 4D B-Spline Model from Tagged MRI. IEEE Trans. Medical Imaging 18 (10) (1999)
Amir A. Amini, Yasheng Chen, Dana Abendschein
Comparison of Land-Mark-Based and Curve-Based Thin-Plate Warps for Analysis of Left-Ventricular Motion from Tagged MRI. MICCAI (1999)
Amir A. Amini, Jiantao Huang, Andreas K. Klein, Petia Radeva, Mohamed Elayyadi
Flexible Shapes for Segmentation and Tracking of Cardiovascular Data. ICIP (2) (1998)
Amir A. Amini, Petia Radeva, Mohamed Elayyadi, Debiao Li
Measurement of 3D Motion of Myocardial Material Points from Explicit B-Surface Reconstruction of Tagged MRI Data. MICCAI (1998)
Amir A. Amini, Yasheng Chen, Jean Sun, Vaidy Mani
Dense 2d Displacement Reconstruction from SPAMM-MRI with Constrained Elastic Splines: Implementation and Validation. MICCAI (1998)
Jiantao Huang, Amir A. Amini
Anatomical Object Volumes from Deformable B-spline Surface Models. ICIP (1) (1998)
Amir A. Amini, Yasheng Chen, Rupert W. Curwen, Vaidy Mani, Jean Sun
Coupled B-Snake Grids and Constrained Thin-Plate Splines for Analysis of 2D Tissue Deformations from Tagged MRI. IEEE Trans. Medical Imaging 17 (3) (1998)
Amir A. Amini, Fred L. Bookstein, David C. Wilson
Biomedical Image Analysis. Comput. Vis. Image Underst. 66 (2) (1997)
Andreas K. Klein, Forester Lee, Amir A. Amini
Quantitative Coronary Angiography with Deformable Spline Models. IEEE Trans. Medical Imaging 16 (5) (1997)
Petia Radeva, Amir A. Amini, Jiantao Huang
Deformable B-Solids and Implicit Snakes for 3D Localization and Tracking of SPAMM MRI Data. Comput. Vis. Image Underst. 66 (2) (1997)
Amir A. Amini, Rupert W. Curwen, John C. Gore
Snakes and Splines for Tracking Non-Rigid Heart Motion. ECCV (2) (1996)
Amir A. Amini
A Scalar Function Formulation for Optical Flow. ECCV (1) (1994)
Amir A. Amini, James S. Duncan
Bending and stretching models for LV wall motion analysis from curves and surfaces. Image Vis. Comput. 10 (6) (1992)
Amir A. Amini, R. L. Owen, P. Anandan, James S. Duncan
Non-Rigid Motion Models for Tracking the Left Ventricular Wall. IPMI (1991)
Amir A. Amini, Terry E. Weymouth, Ramesh C. Jain
Using Dynamic Programming for Solving Variational Problems in Vision. IEEE Trans. Pattern Anal. Mach. Intell. 12 (9) (1990)
Amir A. Amini, Terry E. Weymouth, David J. Anderson
A parallel algorithm for determining two-dimensional object positions using incomplete information about their boundaries. Pattern Recognit. 22 (1) (1989)
Amir A. Amini, Saeid Tehrani, Terry E. Weymouth
Using Dynamic Programming For Minimizing The Energy Of Active Contours In The Presence Of Hard Constraints. ICCV (1988)