Aly A. Khan

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 12

Top Topics

Active Learning

Equivalence Class

Privacy Preserving

Histopathology Images

Top Venues

Publications

Renyu Zhang, Aly A. Khan, Yuxin Chen, Robert L. Grossman
Enhancing Instance-Level Image Classification with Set-Level Labels. ICLR (2024)
Leah L. Weber, Derek Reiman, Mrinmoy Saha Roddur, Yuanyuan Qi, Mohammed El-Kebir, Aly A. Khan
TRIBAL: Tree Inference of B Cell Clonal Lineages. RECOMB (2024)
Renyu Zhang, Aly A. Khan, Yuxin Chen, Robert L. Grossman
Enhancing Instance-Level Image Classification with Set-Level Labels. CoRR (2023)
Renyu Zhang, Aly A. Khan, Robert L. Grossman, Yuxin Chen
Scalable Batch-Mode Deep Bayesian Active Learning via Equivalence Class Annealing. ICLR (2023)
Talal Ahmed, Mark A. Carty, Stephane Wenric, Jonathan R. Dry, Ameen A. Salahudeen, Aly A. Khan, Eric Lefkofsky, Martin C. Stumpe, Raphael Pelossof
Privacy preserving validation for multiomic prediction models. Briefings Bioinform. 23 (3) (2022)
Renyu Zhang, Aly A. Khan, Robert L. Grossman, Yuxin Chen
BALanCe: Deep Bayesian Active Learning via Equivalence Class Annealing. CoRR (2021)
Derek Reiman, Godhev Kumar Manakkat Vijay, Heping Xu, Andrew Sonin, Dianyu Chen, Nathan Salomonis, Harinder Singh, Aly A. Khan
Pseudocell Tracer - A method for inferring dynamic trajectories using scRNAseq and its application to B cells undergoing immunoglobulin class switch recombination. PLoS Comput. Biol. 17 (5) (2021)
Renyu Zhang, Christopher Weber, Robert Grossman, Aly A. Khan
Evaluating and interpreting caption prediction for histopathology images. MLHC (2020)
Renyu Zhang, Aly A. Khan, Robert L. Grossman
Evaluation of Hyperbolic Attention in Histopathology Images. BIBE (2020)
Derek Reiman, Lingdao Sha, Irvin Ho, Timothy Tan, Denise Lau, Aly A. Khan
Integrating RNA expression and visual features for immune infiltrate prediction. PSB (2019)
Somaye Hashemifar, Behnam Neyshabur, Aly A. Khan, Jinbo Xu
Predicting protein-protein interactions through sequence-based deep learning. Bioinform. 34 (17) (2018)
Stefan Canzar, Karlynn E. Neu, Qingming Tang, Patrick C. Wilson, Aly A. Khan
BASIC: BCR assembly from single cells. Bioinform. 33 (3) (2017)