Somaye Hashemifar

Publication Activity (10 Years)

Years Active: 2013-2023
Publications (10 Years): 14

Top Topics

Convex Optimization

Protein Interaction Networks

Top Venues

Trans. Mach. Learn. Res.

J. Comput. Biol.

Publications

Fatemeh Haghighi, Soumitra Ghosh, Sarah Chu, Hai Ngu, Mohsen Hejrati, Han Hui Lin, Baris Bingol, Somaye Hashemifar
Self-supervised Learning for Segmentation and Quantification of Dopamine Neurons in Parkinson's Disease. Trans. Mach. Learn. Res. 2023 (2023)
Saba Dadsetan, Mohsen Hejrati, Shandong Wu, Somaye Hashemifar
Robust Alzheimer's Progression Modeling using Cross-Domain Self-Supervised Deep Learning. Trans. Mach. Learn. Res. 2023 (2023)
Hosein Barzekar, Hai Ngu, Han Hui Lin, Mohsen Hejrati, Steven Ray Valdespino, Sarah Chu, Baris Bingol, Somaye Hashemifar, Soumitra Ghosh
Multiclass Semantic Segmentation to Identify Anatomical Sub-Regions of Brain and Measure Neuronal Health in Parkinson's Disease. CoRR (2023)
Fatemeh Haghighi, Soumitra Ghosh, Hai Ngu, Sarah Chu, Han Hui Lin, Mohsen Hejrati, Baris Bingol, Somaye Hashemifar
Self-supervised Learning for Segmentation and Quantification of Dopamine Neurons in Parkinson's Disease. CoRR (2023)
Saba Dadsetan, Mohsen Hejrati, Shandong Wu, Somaye Hashemifar
Cross-Domain Self-Supervised Deep Learning for Robust Alzheimer's Disease Progression Modeling. CoRR (2022)
Claudia Iriondo, Evan Casey, Mohsen Hejrati, Somaye Hashemifar
DeepAD: A Robust Deep Learning Model of Alzheimer's Disease Progression for Real-World Clinical Applications. CoRR (2022)
Somaye Hashemifar, Behnam Neyshabur, Aly A. Khan, Jinbo Xu
Predicting protein-protein interactions through sequence-based deep learning. Bioinform. 34 (17) (2018)
Somaye Hashemifar
Computational prediction and analysis of protein-protein interaction networks. CoRR (2017)
Somaye Hashemifar, Jianzhu Ma, Hammad Naveed, Stefan Canzar, Jinbo Xu
ModuleAlign: module-based global alignment of protein-protein interaction networks. Bioinform. 32 (17) (2016)
Dinanath Sulakhe, Bingqing Xie, Andrew Taylor, Mark D'Souza, Sandhya Balasubramanian, Somaye Hashemifar, Steven White, Utpal J. Dave, Gady Agam, Jinbo Xu, Sheng Wang, T. Conrad Gilliam, Natalia Maltsev
Lynx: a knowledge base and an analytical workbench for integrative medicine. Nucleic Acids Res. 44 (Database-Issue) (2016)
Somaye Hashemifar, Qixing Huang, Jinbo Xu
Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization. RECOMB (2016)
Somaye Hashemifar, Qixing Huang, Jinbo Xu
Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization. J. Comput. Biol. 23 (11) (2016)
Somaye Hashemifar, Qixing Huang, Jinbo Xu
Joint alignment of multiple protein-protein interaction networks via convex optimization. CoRR (2016)
Somaye Hashemifar, Behnam Neyshabur, Jinbo Xu
Joint inference of tissue-specific networks with a scale free topology. BIBM (2015)
Somaye Hashemifar, Jinbo Xu
HubAlign: an accurate and efficient method for global alignment of protein-protein interaction networks. Bioinform. 30 (17) (2014)
Behnam Neyshabur, Ahmadreza Khadem, Somaye Hashemifar, Seyed Shahriar Arab
NETAL: a new graph-based method for global alignment of protein-protein interaction networks. Bioinform. 29 (13) (2013)