Alicia Oshlack

Publication Activity (10 Years)

Years Active: 2006-2022
Publications (10 Years): 7

Top Topics

Clonal Selection

False Detections

Detecting And Tracking Multiple

Top Venues

PLoS Comput. Biol.

Publications

Belinda Phipson, Choon Boon Sim, Enzo R. Porrello, Alex W. Hewitt, Joseph E. Powell, Alicia Oshlack
testing for differences in cell type proportions in single cell data. Bioinform. 38 (20) (2022)
Christoffer Flensburg, Alicia Oshlack, Ian J. Majewski
Detecting copy number alterations in RNA-Seq using SuperFreq. Bioinform. 37 (22) (2021)
Christoffer Flensburg, Tobias Sargeant, Alicia Oshlack, Ian J. Majewski
SuperFreq: Integrated mutation detection and clonal tracking in cancer. PLoS Comput. Biol. 16 (2) (2020)
Luke Zappia, Belinda Phipson, Alicia Oshlack
Exploring the single-cell RNA-seq analysis landscape with the scRNA-tools database. PLoS Comput. Biol. 14 (6) (2018)
Jovana Maksimovic, Belinda Phipson, Alicia Oshlack
A cross-package Bioconductor workflow for analysing methylation array data. F1000Research 5 (2016)
Belinda Phipson, Jovana Maksimovic, Alicia Oshlack
missMethyl: an R package for analyzing data from Illumina's HumanMethylation450 platform. Bioinform. 32 (2) (2016)
Harriet Dashnow, Susan Tan, Debjani Das, Simon Easteal, Alicia Oshlack
Genotyping microsatellites in next-generation sequencing data. BMC Bioinform. 16 (S-2) (2015)
Simon P. Sadedin, Bernard J. Pope, Alicia Oshlack
Bpipe: a tool for running and managing bioinformatics pipelines. Bioinform. 28 (11) (2012)
Alicia Oshlack, Adrien E. Chabot, Gordon K. Smyth, Yoav Gilad
Using DNA microarrays to study gene expression in closely related species. Bioinform. 23 (10) (2007)
Matthew E. Ritchie, Jeremy David Silver, Alicia Oshlack, Melissa Holmes, Dileepa S. Diyagama, Andrew J. Holloway, Gordon K. Smyth
A comparison of background correction methods for two-colour microarrays. Bioinform. 23 (20) (2007)
Andrew J. Holloway, Alicia Oshlack, Dileepa S. Diyagama, David D. L. Bowtell, Gordon K. Smyth
Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis. BMC Bioinform. 7 (2006)