Alice Carolyn McHardy

Publication Activity (10 Years)

Years Active: 2004-2024
Publications (10 Years): 4

Top Topics

Ordinary Least Squares

Assembly Process

Computational Biology

Top Venues

Briefings Bioinform.

Publications

MohammadAli SadraeiJavaeri, Ehsaneddin Asgari, Alice Carolyn McHardy, Hamid Reza Rabiee
SuperPos-Prompt: Enhancing Soft Prompt Tuning of Language Models with Superposition of Multi Token Embeddings. CoRR (2024)
Johannes Dröge, Alexander Schönhuth, Alice Carolyn McHardy
A probabilistic model to recover individual genomes from metagenomes. PeerJ Prepr. 4 (2016)
I. Gregor, Alexander Schönhuth, Alice Carolyn McHardy
: strain aware gene assembly of metagenomes. Bioinform. 32 (17) (2016)
David Laehnemann, Arndt Borkhardt, Alice Carolyn McHardy
Denoising DNA deep sequencing data - high-throughput sequencing errors and their correction. Briefings Bioinform. 17 (1) (2016)
Johannes Dröge, I. Gregor, Alice Carolyn McHardy
: precise taxonomic assignment of metagenomes by fast approximation of evolutionary neighborhoods. Bioinform. 31 (6) (2015)
Alice Carolyn McHardy
How to Grow a Computational Biology Lab. PLoS Comput. Biol. 11 (9) (2015)
Christina Kratsch, Alice Carolyn McHardy
RidgeRace: ridge regression for continuous ancestral character estimation on phylogenetic trees. Bioinform. 30 (17) (2014)
Lars Steinbrück, Alice Carolyn McHardy
Inference of Genotype-Phenotype Relationships in the Antigenic Evolution of Human Influenza A (H3N2) Viruses. PLoS Comput. Biol. 8 (4) (2012)
Johannes Dröge, Alice Carolyn McHardy
Taxonomic binning of metagenome samples generated by next-generation sequencing technologies. Briefings Bioinform. 13 (6) (2012)
Lars Steinbrück, Alice Carolyn McHardy
Allele dynamics plots for the study of evolutionary dynamics in viral populations. Nucleic Acids Res. 39 (1) (2011)
Sebastian G. A. Konietzny, Laura Dietz, Alice Carolyn McHardy
Inferring functional modules of protein families with probabilistic topic models. BMC Bioinform. 12 (2011)
Alice Carolyn McHardy, Alexander Goesmann, Alfred Pühler, Folker Meyer
Development of joint application strategies for two microbial gene finders. Bioinform. 20 (10) (2004)