Inferring functional modules of protein families with probabilistic topic models.
Sebastian G. A. KonietznyLaura DietzAlice Carolyn McHardyPublished in: BMC Bioinform. (2011)
Keyphrases
- functional modules
- protein families
- protein interaction
- protein interaction networks
- biological networks
- topic models
- protein sequences
- protein protein interactions
- information flow
- gene expression
- biological processes
- complex networks
- amino acids
- dna sequences
- binding sites
- information retrieval
- computational methods
- pairwise
- bayesian networks
- protein complexes
- protein function
- protein structure
- databases
- biological data
- pattern mining
- probabilistic model
- machine learning