Multistage Gene Normalization and SVM-Based Ranking for Protein Interactor Extraction in Full-Text Articles.
Hong-Jie DaiPo-Ting LaiRichard Tzong-Han TsaiPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2010)
Keyphrases
- multistage
- journal articles
- sequence alignment
- protein protein interaction networks
- cellular processes
- gene ontology terms
- homo sapiens
- dynamic programming
- stochastic programming
- digital libraries
- single stage
- stochastic optimization
- production system
- information retrieval systems
- lot sizing
- support vector
- gene prediction
- regulatory networks
- protein interaction
- protein sequences
- gene expression
- biological entities
- amino acids
- genomic sequences
- microarray
- dna binding
- biomedical literature
- protein protein interactions
- optimal policy
- protein structure
- information extraction
- protein interaction networks
- relevance feedback
- transcription factor binding sites
- gene expression data
- gene ontology
- medical subject headings
- sufficient conditions
- signaling pathways
- interaction networks
- support vector machine
- search space