Alignment Free Sequence Similarity with Bounded Hamming Distance.

Alberto Apostolico Concettina Guerra Cinzia Pizzi

Published in: DCC (2014)

Keyphrases

hamming distance
sequence similarity
computational methods
pattern matching
distance measure

protein structure prediction
genome scale
binary strings
dynamic time warping
secondary structure

hash functions
binary codes
edit distance
binary representation

data sets
iris recognition
similarity search
machine learning