Local protein threading by Mixed Integer Programming.
Guillaume ColletRumen AndonovNicola YanevJean-François GibratPublished in: Discret. Appl. Math. (2011)
Keyphrases
- mixed integer programming
- protein structure prediction
- column generation
- lot sizing
- protein sequences
- production planning
- protein structure
- dantzig wolfe decomposition
- mixed integer
- amino acids
- lagrangian relaxation
- unit commitment
- np complete
- branch and bound algorithm
- constraint satisfaction
- probability distribution
- decision trees