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ExpaRNA-P: simultaneous exact pattern matching and folding of RNAs.
Christina Otto
Mathias Möhl
Steffen Heyne
Mika Amit
Gad M. Landau
Rolf Backofen
Sebastian Will
Published in:
BMC Bioinform. (2014)
Keyphrases
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pattern matching
regular expressions
pattern matching algorithm
string matching
tree matching
matching process
protein folding
secondary structure
boyer moore
approximate pattern matching
matching strategy
lower bound
microarray
dynamic programming
bit parallel
data structure
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