Self-organizing maps with variable neighborhoods facilitate learning of chromatin accessibility signal shapes associated with regulatory elements.
Tara EicherJany ChanHan LuuRaghu MachirajuEwy A. MathéPublished in: BMC Bioinform. (2021)
Keyphrases
- self organizing maps
- facilitate learning
- regulatory elements
- transcription factors
- neural network
- problem based learning
- sequence data
- unsupervised learning
- dna sequences
- learning environment
- learning opportunities
- informal learning
- gene expression
- binding sites
- component analysis
- k means
- machine learning
- input data
- information extraction
- genome wide
- pairwise
- natural language processing
- computational biology
- data sets