Hardness of Covering Alignment: Phase Transition in Post-Sequence Genomics.
Romeo RizziMassimo CairoVeli MäkinenAlexandru I. TomescuDaniel ValenzuelaPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2019)
Keyphrases
- phase transition
- constraint satisfaction
- sequence alignment
- satisfiability problem
- randomly generated
- np complete
- random instances
- hard problems
- sequence analysis
- combinatorial problems
- graph coloring
- average degree
- random graphs
- global alignment
- deep structure
- cellular automata
- hamiltonian cycle
- relational learning
- np complete problems
- high throughput
- random constraint satisfaction problems