A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases.
Chirag JainAlexander T. DiltheySergey KorenSrinivas AluruAdam M. PhillippyPublished in: RECOMB (2017)
Keyphrases
- databases
- search space
- preprocessing
- k means
- significant improvement
- cost function
- computationally efficient
- learning algorithm
- times faster
- matching algorithm
- dynamic programming
- detection algorithm
- classification algorithm
- recognition algorithm
- mapping function
- neural network
- segmentation algorithm
- simulated annealing
- similarity measure
- optimization algorithm
- denoising
- clustering method
- mobile robot
- optimal solution
- path planning
- objective function
- estimation algorithm
- piecewise linear
- data mining