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A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases.
Chirag Jain
Alexander T. Dilthey
Sergey Koren
Srinivas Aluru
Adam M. Phillippy
Published in:
RECOMB (2017)
Keyphrases
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databases
search space
preprocessing
k means
significant improvement
cost function
computationally efficient
learning algorithm
times faster
matching algorithm
dynamic programming
detection algorithm
classification algorithm
recognition algorithm
mapping function
neural network
segmentation algorithm
simulated annealing
similarity measure
optimization algorithm
denoising
clustering method
mobile robot
optimal solution
path planning
objective function
estimation algorithm
piecewise linear
data mining