Sim4db and Leaff: utilities for fast batch spliced alignment and sequence indexing.

Brian Walenz Liliana Florea

Published in: Bioinform. (2011)

Keyphrases

sequence alignment
database
geometric hashing
information retrieval
rna sequences
multiple sequence alignment
utility function
alternative splicing
global alignment
content based retrieval
image alignment
indexing scheme
indexing method
data collection
active learning
rna secondary structures
pairwise