A Resistive CAM Processing-in-Storage Architecture for DNA Sequence Alignment.
Roman KaplanLeonid YavitsRan GinosarUri C. WeiserPublished in: IEEE Micro (2017)
Keyphrases
- sequence alignment
- binding sites
- real time
- processing capabilities
- pairwise
- dna sequences
- comparative genomics
- parallel architecture
- protein sequences
- phylogenetic analysis
- memory management
- dynamic programming
- gpu accelerated
- dna computing
- central processor
- smith waterman
- multiple alignment
- processing elements
- random access
- storage structures
- information processing
- sequence analysis
- biological sequences
- genome sequences
- sequence databases
- processing units
- gene expression
- reinforcement learning
- content addressable memory
- machine learning