BRONCO: Biomedical entity Relation ONcology COrpus for extracting gene-variant-disease-drug relations.
Kyubum LeeSunwon LeeSungjoon ParkSunkyu KimSuhkyung KimKwanghun ChoiAik Choon TanJaewoo KangPublished in: Database J. Biol. Databases Curation (2016)
Keyphrases
- entity extraction
- genia corpus
- named entities
- biomedical literature
- biological entities
- text mining
- relation extraction
- medline abstracts
- disease genes
- binary relations
- automatic extraction
- coreference resolution
- gene function
- semantic relations
- annotated corpus
- equivalence relation
- manually annotated
- entity ranking
- protein protein interaction networks
- named entity recognition
- candidate genes
- information extraction
- multiple relations
- dependency relations
- named entity disambiguation
- gene expression
- natural language processing
- biomedical text
- gene expression data
- differentially expressed genes
- microarray
- question answering
- noun phrases
- clinical trials
- dna microarray
- biomedical ontologies
- gene gene interactions
- gene sets
- knowledge base