Reconfigurable architectures for bio-sequence database scanning on FPGAs.
Timothy F. OliverBertil SchmidtDouglas L. MaskellPublished in: IEEE Trans. Circuits Syst. II Express Briefs (2005)
Keyphrases
- sequence databases
- field programmable gate array
- hardware implementation
- sequence patterns
- protein sequences
- smart camera
- sequence data
- reconfigurable hardware
- similarity search
- embedded systems
- sequential patterns
- sequential pattern mining
- low cost
- functional units
- sequence alignment
- search tools
- web pages
- data sets
- biological data
- parallel computing
- indexing methods
- end users
- database