GraphClust: alignment-free structural clustering of local RNA secondary structures.

Steffen Heyne Fabrizio Costa Dominic Rose Rolf Backofen

Published in: Bioinform. (2012)

Keyphrases

rna secondary structures
rna sequences
secondary structure
clustering algorithm
rna secondary structure prediction
k means
edit distance
stochastic context free grammars
data clustering
dna sequences
data points
structural information
self organizing maps
neural network