Parallel Smith-Waterman Comparison on Multicore and Manycore Computing Platforms with BSP++.
Khaled HamidoucheFernando Machado MendoncaJoel FalcouAlba Cristina Magalhaes Alves de MeloDaniel EtiemblePublished in: Int. J. Parallel Program. (2013)
Keyphrases
- computing platform
- parallel computing
- graphics processing units
- shared memory
- parallel programming
- parallel architectures
- computing systems
- smith waterman
- distributed computing
- parallel processing
- dna sequences
- computing environments
- sequence alignment
- quadtree
- computer systems
- data structure
- subsequence matching
- database