BioPreDyn-bench: a suite of benchmark problems for dynamic modelling in systems biology.
Alejandro Fernández VillaverdeDavid HenriquesKieran SmallboneSophia BongardJoachim SchmidDamjan Cicin-SainAnton CrombachJulio Saez-RodriguezKlaus MauchEva Balsa-CantoPedro MendesJohannes JaegerJulio R. BangaPublished in: BMC Syst. Biol. (2015)
Keyphrases
- benchmark problems
- systems biology
- high throughput
- simulated annealing
- optimization problems
- biochemical networks
- biological systems
- biological data
- molecular biology
- gene regulatory networks
- biological networks
- evolutionary algorithm
- protein protein interactions
- life sciences
- machine learning
- object oriented
- data sets
- cell biology
- databases