Improving links between literature and biological data with text mining: a case study with GEO, PDB and MEDLINE.
Aurélie NévéolW. John WilburZhiyong LuPublished in: Database J. Biol. Databases Curation (2012)
Keyphrases
- biological data
- text mining
- biomedical literature
- protein protein interactions
- knowledge discovery
- data analysis
- high throughput
- biological processes
- link analysis
- published literature
- molecular biology
- information extraction
- life sciences
- biological networks
- microarray data
- systems biology
- data integration
- statistical methods
- data sources
- case study
- information retrieval
- natural language processing
- machine learning
- data mining
- microarray
- protein interaction
- biological information
- huge volume of data
- gene regulatory networks
- real time
- mining graph data
- complex networks
- gene ontology
- biological sequences
- expectation maximization