Protein Threading by Linear Programming.
Jinbo XuMing LiGuo-Hui LinDongsup KimYing XuPublished in: Pacific Symposium on Biocomputing (2003)
Keyphrases
- linear programming
- protein structure prediction
- linear program
- protein structure
- amino acids
- protein sequences
- dynamic programming
- primal dual
- subcellular localization
- np hard
- protein function
- objective function
- optimal solution
- quadratic programming
- protein protein interactions
- drug design
- integer programming
- feasible solution
- nonlinear programming
- protein folding
- graph theory
- sequence alignment
- constraint propagation
- machine learning
- molecular dynamics
- computational biology
- protein interaction data
- molecular structures
- network flow
- protein structure alignment
- linear arithmetic constraints
- tandem mass spectra
- dead end
- data sets
- mass spectrometry data
- amino acid sequences
- sequence analysis
- high precision
- neural network